64 items (Acaromyces ingoldii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316YFT5	Uncharacterized protein. (1243 aa)
	A0A316Z2B6	RNA-binding domain-containing protein. (201 aa)
	A0A316YZE1	Uncharacterized protein. (945 aa)
	A0A316YYZ7	Uncharacterized protein. (1095 aa)
	A0A316YYT8	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (508 aa)
	A0A316YYH9	RNA-binding domain-containing protein. (315 aa)
	A0A316YXK7	RNA-binding domain-containing protein. (262 aa)
	FA10DRAFT_625	Uncharacterized protein. (211 aa)
	A0A316YWZ0	Nuclear cap-binding protein subunit 2. (257 aa)
	A0A316YW63	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (664 aa)
	A0A316YVQ7	RNA-binding domain-containing protein. (332 aa)
	A0A316YVK3	RNA-binding domain-containing protein. (197 aa)
	A0A316YVB5	Uncharacterized protein. (732 aa)
	A0A316YUS4	RNA-binding domain-containing protein. (502 aa)
	A0A316YUH0	RNA-binding domain-containing protein. (275 aa)
	A0A316YUG4	RRM domain-containing protein. (389 aa)
	A0A316YUB9	Uncharacterized protein. (1515 aa)
	A0A316YU89	Uncharacterized protein. (560 aa)
	A0A316YU88	Uncharacterized protein. (759 aa)
	A0A316YU05	RRM domain-containing protein. (630 aa)
	A0A316YTZ0	RRM domain-containing protein. (328 aa)
	A0A316YT45	RRM domain-containing protein. (671 aa)
	A0A316YSY4	Uncharacterized protein. (486 aa)
	A0A316YSV7	RRM domain-containing protein. (285 aa)
	A0A316YS69	Uncharacterized protein. (648 aa)
	A0A316YS42	RNA-binding domain-containing protein. (287 aa)
	A0A316YRX4	G-patch domain-containing protein. (583 aa)
	A0A316YRT5	RNA-binding domain-containing protein. (203 aa)
	A0A316YRI9	Uncharacterized protein. (1147 aa)
	A0A316YRC8	RNA-binding domain-containing protein. (355 aa)
	TIF35	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (303 aa)
	A0A316YRC5	RRM domain-containing protein. (236 aa)
	A0A316YQL9	RRM domain-containing protein. (606 aa)
	A0A316YQ40	Uncharacterized protein. (802 aa)
	A0A316YPF9	Uncharacterized protein. (455 aa)
	A0A316YNW7	RNA-binding domain-containing protein. (339 aa)
	A0A316YNJ8	RRM domain-containing protein. (362 aa)
	A0A316YN63	RNA-binding domain-containing protein. (138 aa)
	A0A316YMT9	RNA-binding domain-containing protein. (275 aa)
	A0A316YMR9	RNA-binding domain-containing protein. (195 aa)
	A0A316YMR1	Uncharacterized protein. (310 aa)
	A0A316YM92	RNA-binding domain-containing protein. (361 aa)
	A0A316YLF7	Uncharacterized protein. (1074 aa)
	A0A316YKJ4	Uncharacterized protein. (1047 aa)
	A0A316YKC9	RRM domain-containing protein. (366 aa)
	A0A316YKA5	Uncharacterized protein. (254 aa)
	A0A316YJ30	RRM domain-containing protein. (467 aa)
	A0A316YJ15	Uncharacterized protein. (553 aa)
	A0A316YIV3	Splicing factor, CC1-like protein. (656 aa)
	A0A316YIB2	RNA-binding domain-containing protein. (160 aa)
	A0A316YHZ2	RRM domain-containing protein. (1289 aa)
	A0A316YHS5	Uncharacterized protein. (643 aa)
	A0A316YHI8	RNA-binding domain-containing protein. (181 aa)
	A0A316YG55	RNA-binding domain-containing protein. (234 aa)
	A0A316YFB3	RRM domain-containing protein. (366 aa)
	PRT1	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (748 aa)
	A0A316YDR1	Uncharacterized protein. (318 aa)
	A0A316YDN0	Uncharacterized protein. (344 aa)
	A0A316YD84	RNA-binding domain-containing protein. (888 aa)
	A0A316YD59	Uncharacterized protein. (761 aa)
	A0A316YD34	Uncharacterized protein. (508 aa)
	A0A316YD13	RNA-binding domain-containing protein. (433 aa)
	A0A316YCC1	RRM domain-containing protein. (756 aa)
	A0A316YB69	RNA-binding domain-containing protein. (115 aa)

Your Current Organism:

Acaromyces ingoldii

NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A316YB69	A0A316YD34	A0A316YB69	A0A316YD34	RNA-binding domain-containing protein.	Uncharacterized protein.	0.574
A0A316YB69	A0A316YDN0	A0A316YB69	A0A316YDN0	RNA-binding domain-containing protein.	Uncharacterized protein.	0.549
A0A316YB69	A0A316YHI8	A0A316YB69	A0A316YHI8	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.588
A0A316YB69	A0A316YHS5	A0A316YB69	A0A316YHS5	RNA-binding domain-containing protein.	Uncharacterized protein.	0.958
A0A316YB69	A0A316YHZ2	A0A316YB69	A0A316YHZ2	RNA-binding domain-containing protein.	RRM domain-containing protein.	0.574
A0A316YB69	A0A316YIB2	A0A316YB69	A0A316YIB2	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.603
A0A316YB69	A0A316YJ30	A0A316YB69	A0A316YJ30	RNA-binding domain-containing protein.	RRM domain-containing protein.	0.718
A0A316YB69	A0A316YKA5	A0A316YB69	A0A316YKA5	RNA-binding domain-containing protein.	Uncharacterized protein.	0.934
A0A316YB69	A0A316YKJ4	A0A316YB69	A0A316YKJ4	RNA-binding domain-containing protein.	Uncharacterized protein.	0.587
A0A316YB69	A0A316YM92	A0A316YB69	A0A316YM92	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.598
A0A316YB69	A0A316YMR1	A0A316YB69	A0A316YMR1	RNA-binding domain-containing protein.	Uncharacterized protein.	0.567
A0A316YB69	A0A316YMT9	A0A316YB69	A0A316YMT9	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.474
A0A316YB69	A0A316YN63	A0A316YB69	A0A316YN63	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.549
A0A316YB69	A0A316YNJ8	A0A316YB69	A0A316YNJ8	RNA-binding domain-containing protein.	RRM domain-containing protein.	0.543
A0A316YB69	A0A316YNW7	A0A316YB69	A0A316YNW7	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.574
A0A316YB69	A0A316YPF9	A0A316YB69	A0A316YPF9	RNA-binding domain-containing protein.	Uncharacterized protein.	0.592
A0A316YB69	A0A316YQ40	A0A316YB69	A0A316YQ40	RNA-binding domain-containing protein.	Uncharacterized protein.	0.574
A0A316YB69	A0A316YRC8	A0A316YB69	A0A316YRC8	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.574
A0A316YB69	A0A316YRT5	A0A316YB69	A0A316YRT5	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.633
A0A316YB69	A0A316YRX4	A0A316YB69	A0A316YRX4	RNA-binding domain-containing protein.	G-patch domain-containing protein.	0.541