Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KGL12669.1 | KGL12716.1 | LS73_07855 | LS73_08165 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | Molecular chaperone Hsp90; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.761 |
| KGL12669.1 | KGL12835.1 | LS73_07855 | LS73_06325 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.636 |
| KGL12669.1 | KGL13253.1 | LS73_07855 | LS73_04265 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.644 |
| KGL12669.1 | cbpA | LS73_07855 | LS73_06145 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobalamin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.644 |
| KGL12669.1 | clpP | LS73_07855 | LS73_07545 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.654 |
| KGL12669.1 | dnaJ | LS73_07855 | LS73_07600 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.783 |
| KGL12669.1 | dnaK | LS73_07855 | LS73_07755 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.881 |
| KGL12669.1 | groEL | LS73_07855 | LS73_02840 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.984 |
| KGL12669.1 | groEL-2 | LS73_07855 | LS73_07860 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | Molecular chaperone GroEL; 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; Derived by autom [...] | 0.994 |
| KGL12669.1 | grpE | LS73_07855 | LS73_07750 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.835 |
| KGL12669.1 | hslU | LS73_07855 | LS73_01980 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent protease; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | 0.790 |
| KGL12669.1 | hslV | LS73_07855 | LS73_01975 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.776 |
| KGL12669.1 | htpG | LS73_07855 | LS73_02540 | Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. | Molecular chaperone Hsp90; Molecular chaperone. Has ATPase activity. | 0.761 |
| KGL12675.1 | KGL12716.1 | LS73_07890 | LS73_08165 | Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Molecular chaperone Hsp90; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.722 |
| KGL12675.1 | KGL12835.1 | LS73_07890 | LS73_06325 | Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
| KGL12675.1 | KGL13253.1 | LS73_07890 | LS73_04265 | Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
| KGL12675.1 | cbpA | LS73_07890 | LS73_06145 | Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobalamin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
| KGL12675.1 | clpP | LS73_07890 | LS73_07545 | Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.744 |
| KGL12675.1 | clpX | LS73_07890 | LS73_01135 | Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Clp protease ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.702 |
| KGL12675.1 | dnaJ | LS73_07890 | LS73_07600 | Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.780 |
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