(33 nodes) Mixed, incl. Oxidative phosphorylation, and Antiporter activity network (Methanobacterium formicicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ehbA	Energy-converting hydrogenase B subunit A EhbA. (103 aa)
	ehbB	Energy-converting hydrogenase B subunit B EhbB. (89 aa)
	ehbC	Energy-converting hydrogenase B subunit C EhbC. (90 aa)
	ehbD	Energy-converting hydrogenase B subunit D EhbD. (77 aa)
	ehbE	Energy-converting hydrogenase B subunit E EhbE. (120 aa)
	ehbF	Energy-converting hydrogenase B subunit F EhbF. (501 aa)
	ehbG	Energy-converting hydrogenase B subunit G EhbG. (110 aa)
	ehbH	Energy-converting hydrogenase B subunit H EhbH. (92 aa)
	ehbI	Energy-converting hydrogenase B subunit I EhbI. (165 aa)
	ehbJ	Energy-converting hydrogenase B subunit J EhbJ. (91 aa)
	ehbK	Energy-converting hydrogenase B subunit K EhbK. (453 aa)
	ehbL	Energy-converting hydrogenase B subunit L EhbL. (162 aa)
	ehbM	Energy-converting hydrogenase B subunit M EhbM. (148 aa)
	ehbN	Energy-converting hydrogenase B subunit N EhbN. (375 aa)
	ehbO	Energy-converting hydrogenase B subunit O EhbO. (329 aa)
	ehbP	Energy-converting hydrogenase B subunit P EhbP. (91 aa)
	ehaB	Energy-converting hydrogenase A subunit B EhaB. (167 aa)
	ehaC	Energy-converting hydrogenase A subunit C EhaC. (82 aa)
	ehaD	Energy-converting hydrogenase A subunit D EhaD. (95 aa)
	ehaE	Energy-converting hydrogenase A subunit E EhaE. (86 aa)
	ehaF	Energy-converting hydrogenase A subunit F EhaF. (161 aa)
	ehaG	Energy-converting hydrogenase A subunit G EhaG. (226 aa)
	ehaH	Energy-converting hydrogenase A subunit H EhaH. (225 aa)
	ehaI	Energy-converting hydrogenase A subunit I EhaI. (71 aa)
	ehaJ	Energy-converting hydrogenase A subunit J EhaJ. (283 aa)
	ehaK	Energy-converting hydrogenase A subunit K EhaK. (86 aa)
	ehaL	Energy-converting hydrogenase A subunit L EhaL. (107 aa)
	ehaM	Energy-converting hydrogenase A subunit M EhaM. (140 aa)
	ehaN	Energy-converting hydrogenase A subunit N EhaN. (149 aa)
	ehaO	Energy-converting hydrogenase A subunit O EhaO; Belongs to the complex I 49 kDa subunit family. (378 aa)
	ehaP	Energy-converting hydrogenase A subunit P EhaP. (347 aa)
	BRM9_1339	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein. (250 aa)
	BRM9_1340	CBS domain-containing protein. (211 aa)

Your Current Organism:

Methanobacterium formicicum

NCBI taxonomy Id: 2162
Other names: ATCC 33274, JCM 10132, M. formicicum, Methanobacterium sp. BRM9, NBRC 100475, OCM 55, strain MF

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRM9_1339	BRM9_1340	BRM9_1339	BRM9_1340	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	CBS domain-containing protein.	0.905
BRM9_1339	ehaB	BRM9_1339	BRM9_1320	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	Energy-converting hydrogenase A subunit B EhaB.	0.453
BRM9_1339	ehaC	BRM9_1339	BRM9_1321	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	Energy-converting hydrogenase A subunit C EhaC.	0.450
BRM9_1339	ehaD	BRM9_1339	BRM9_1322	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	Energy-converting hydrogenase A subunit D EhaD.	0.457
BRM9_1339	ehaE	BRM9_1339	BRM9_1323	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	Energy-converting hydrogenase A subunit E EhaE.	0.471
BRM9_1339	ehaF	BRM9_1339	BRM9_1324	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	Energy-converting hydrogenase A subunit F EhaF.	0.481
BRM9_1339	ehaG	BRM9_1339	BRM9_1325	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	Energy-converting hydrogenase A subunit G EhaG.	0.427
BRM9_1339	ehaH	BRM9_1339	BRM9_1326	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	Energy-converting hydrogenase A subunit H EhaH.	0.524
BRM9_1339	ehaL	BRM9_1339	BRM9_1330	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	Energy-converting hydrogenase A subunit L EhaL.	0.573
BRM9_1339	ehaM	BRM9_1339	BRM9_1331	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	Energy-converting hydrogenase A subunit M EhaM.	0.651
BRM9_1339	ehaP	BRM9_1339	BRM9_1334	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	Energy-converting hydrogenase A subunit P EhaP.	0.901
BRM9_1340	BRM9_1339	BRM9_1340	BRM9_1339	CBS domain-containing protein.	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	0.905
BRM9_1340	ehaJ	BRM9_1340	BRM9_1328	CBS domain-containing protein.	Energy-converting hydrogenase A subunit J EhaJ.	0.541
BRM9_1340	ehaP	BRM9_1340	BRM9_1334	CBS domain-containing protein.	Energy-converting hydrogenase A subunit P EhaP.	0.727
BRM9_1340	ehbI	BRM9_1340	BRM9_0230	CBS domain-containing protein.	Energy-converting hydrogenase B subunit I EhbI.	0.432
BRM9_1340	ehbK	BRM9_1340	BRM9_0232	CBS domain-containing protein.	Energy-converting hydrogenase B subunit K EhbK.	0.614
BRM9_1340	ehbL	BRM9_1340	BRM9_0233	CBS domain-containing protein.	Energy-converting hydrogenase B subunit L EhbL.	0.625
BRM9_1340	ehbO	BRM9_1340	BRM9_0236	CBS domain-containing protein.	Energy-converting hydrogenase B subunit O EhbO.	0.611
ehaB	BRM9_1339	BRM9_1320	BRM9_1339	Energy-converting hydrogenase A subunit B EhaB.	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	0.453
ehaB	ehaC	BRM9_1320	BRM9_1321	Energy-converting hydrogenase A subunit B EhaB.	Energy-converting hydrogenase A subunit C EhaC.	0.930