STRINGSTRING
BRM9_0926 BRM9_0926 cbiB cbiB BRM9_2350 BRM9_2350 BRM9_2344 BRM9_2344 BRM9_2339 BRM9_2339 BRM9_2338 BRM9_2338 BRM9_2314 BRM9_2314 BRM9_2312 BRM9_2312 BRM9_2311 BRM9_2311 BRM9_2310 BRM9_2310 BRM9_2218 BRM9_2218 BRM9_2213 BRM9_2213 BRM9_2193 BRM9_2193 lolD3 lolD3 BRM9_2191 BRM9_2191 macB macB BRM9_2185 BRM9_2185 lolD lolD BRM9_2166 BRM9_2166 BRM9_2096 BRM9_2096 BRM9_2054 BRM9_2054 BRM9_2047 BRM9_2047 BRM9_2044 BRM9_2044 BRM9_2037 BRM9_2037 trkA1 trkA1 BRM9_2022 BRM9_2022 copB copB BRM9_1999 BRM9_1999 BRM9_1980 BRM9_1980 BRM9_1959 BRM9_1959 BRM9_1889 BRM9_1889 BRM9_1888 BRM9_1888 BRM9_1885 BRM9_1885 BRM9_1865 BRM9_1865 secE secE BRM9_1791 BRM9_1791 cbiP cbiP lolD1 lolD1 BRM9_1748 BRM9_1748 BRM9_1744 BRM9_1744 cbiO4 cbiO4 cbiQ3 cbiQ3 feoB2 feoB2 cbiQ2 cbiQ2 BRM9_1592 BRM9_1592 BRM9_1577 BRM9_1577 arsB arsB BRM9_1568 BRM9_1568 cbiM1 cbiM1 cbiN1 cbiN1 cbiQ1 cbiQ1 cbiO1 cbiO1 BRM9_1456 BRM9_1456 BRM9_1378 BRM9_1378 BRM9_1365 BRM9_1365 ehaN ehaN ehaJ ehaJ BRM9_1261 BRM9_1261 feoB1 feoB1 BRM9_1255 BRM9_1255 BRM9_1248 BRM9_1248 BRM9_1247 BRM9_1247 BRM9_1221 BRM9_1221 BRM9_1199 BRM9_1199 BRM9_1191 BRM9_1191 BRM9_1190 BRM9_1190 BRM9_1189 BRM9_1189 BRM9_1141 BRM9_1141 BRM9_1058 BRM9_1058 BRM9_0048 BRM9_0048 BRM9_0049 BRM9_0049 BRM9_0072 BRM9_0072 mthK mthK BRM9_0104 BRM9_0104 arsA arsA BRM9_0123 BRM9_0123 BRM9_0124 BRM9_0124 BRM9_0125 BRM9_0125 copA copA fdhC fdhC BRM9_0185 BRM9_0185 BRM9_0187 BRM9_0187 BRM9_0206 BRM9_0206 BRM9_0207 BRM9_0207 ehbA ehbA ehbB ehbB ehbC ehbC ehbE ehbE ehbF ehbF ehbH ehbH ehbI ehbI ehbO ehbO BRM9_0251 BRM9_0251 BRM9_0322 BRM9_0322 secY secY BRM9_0422 BRM9_0422 BRM9_0425 BRM9_0425 BRM9_0474 BRM9_0474 BRM9_0482 BRM9_0482 BRM9_0495 BRM9_0495 BRM9_0516 BRM9_0516 sulP sulP BRM9_0534 BRM9_0534 BRM9_0558 BRM9_0558 BRM9_0568 BRM9_0568 BRM9_0570 BRM9_0570 BRM9_0583 BRM9_0583 aqpM aqpM amt1 amt1 amt2 amt2 BRM9_0681 BRM9_0681 BRM9_0682 BRM9_0682 BRM9_0734 BRM9_0734 pstB pstB pstA pstA pstC pstC pstS1 pstS1 pstS2 pstS2 ahaI ahaI ahaK ahaK atpE atpE ahaC ahaC ahaF ahaF ahaA ahaA ahaB ahaB ahaD ahaD BRM9_0849 BRM9_0849 BRM9_0851 BRM9_0851 BRM9_0855 BRM9_0855 BRM9_0866 BRM9_0866 BRM9_0873 BRM9_0873 BRM9_0874 BRM9_0874 sufC sufC BRM9_0924 BRM9_0924 BRM9_0942 BRM9_0942 secD secD secF secF mntP mntP BRM9_1057 BRM9_1057
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BRM9_0926K+-dependent Na+/Ca+ exchanger. (338 aa)
cbiBCobalamin biosynthesis protein CbiB; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (344 aa)
BRM9_2350Hypothetical protein. (423 aa)
BRM9_2344Hypothetical protein. (202 aa)
BRM9_2339Iron ABC transporter permease protein. (352 aa)
BRM9_2338Iron ABC transporter ATP-binding protein. (254 aa)
BRM9_2314ABC transporter permease protein. (399 aa)
BRM9_2312ABC transporter permease protein. (363 aa)
BRM9_2311ABC transporter ATP-binding protein. (217 aa)
BRM9_2310ABC transporter permease protein. (384 aa)
BRM9_2218ABC transporter permease protein. (394 aa)
BRM9_2213MFS transporter. (587 aa)
BRM9_2193ABC transporter permease protein. (373 aa)
lolD3ABC transporter ATP-binding protein. (222 aa)
BRM9_2191ABC transporter permease protein. (350 aa)
macBABC transporter ATP-binding protein. (219 aa)
BRM9_2185ABC transporter permease protein. (387 aa)
lolDABC transporter ATP-binding protein. (231 aa)
BRM9_2166Potassium uptake protein TrkH family. (476 aa)
BRM9_2096Transporter ExbD/Tol family. (131 aa)
BRM9_2054MatE efflux family protein. (460 aa)
BRM9_2047MFS transporter. (429 aa)
BRM9_2044Hypothetical protein. (351 aa)
BRM9_2037DASS family transporter. (452 aa)
trkA1Potassium uptake protein TrkA family. (216 aa)
BRM9_2022Hypothetical protein. (202 aa)
copBCopper-translocating P-type ATPase. (668 aa)
BRM9_1999ABC transporter permease protein. (379 aa)
BRM9_1980MFS transporter. (465 aa)
BRM9_1959MFS transporter. (484 aa)
BRM9_1889ABC transporter ATP-binding protein. (217 aa)
BRM9_1888ABC transporter permease protein. (231 aa)
BRM9_1885Ion transport protein. (283 aa)
BRM9_1865BioY family protein. (207 aa)
secEPreprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (62 aa)
BRM9_1791Calcium-transporting P-type ATPase. (841 aa)
cbiPCobyric acid synthase CbiP; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (510 aa)
lolD1ABC transporter ATP-binding protein. (221 aa)
BRM9_1748ABC transporter permease protein. (370 aa)
BRM9_1744MatE efflux family protein. (474 aa)
cbiO4Cobalt ABC transporter ATP-binding protein CbiO4; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (333 aa)
cbiQ3Cobalt ABC transporter permease protein CbiQ3. (261 aa)
feoB2Ferrous iron transport protein B FeoB2. (710 aa)
cbiQ2Cobalt ABC transporter permease protein CbiQ2. (290 aa)
BRM9_1592YhgE/Pip-like protein. (634 aa)
BRM9_1577MFS transporter. (524 aa)
arsBArsenical-resistance protein ArsB. (367 aa)
BRM9_1568Transporter CDF family. (296 aa)
cbiM1Cobalamin biosynthesis protein CbiM1; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (228 aa)
cbiN1Cobalt transport protein CbiN1; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (104 aa)
cbiQ1Cobalt ABC transporter permease protein CbiQ1. (265 aa)
cbiO1Cobalt ABC transporter ATP-binding protein CbiO1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (279 aa)
BRM9_1456ABC transporter permease protein. (242 aa)
BRM9_1378CobB/CobQ-like glutamine amidotransferase domain-containing protein. (240 aa)
BRM9_1365Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. (312 aa)
ehaNEnergy-converting hydrogenase A subunit N EhaN. (149 aa)
ehaJEnergy-converting hydrogenase A subunit J EhaJ. (283 aa)
BRM9_1261Heavy metal translocating P-type ATPase. (650 aa)
feoB1Ferrous iron transport protein B FeoB1. (667 aa)
BRM9_1255GPR1/FUN34/yaaH family protein. (192 aa)
BRM9_1248ZIP family zinc transporter. (248 aa)
BRM9_1247MFS transporter. (468 aa)
BRM9_1221Transporter Na+/H+ antiporter family. (397 aa)
BRM9_1199Divalent cation transporter mgtE family. (327 aa)
BRM9_1191ABC transporter ATP-binding protein. (226 aa)
BRM9_1190ABC transporter permease protein. (379 aa)
BRM9_1189MFS transporter. (480 aa)
BRM9_1141MFS transporter. (455 aa)
BRM9_1058Zinc ABC transporter permease protein. (259 aa)
BRM9_0048Hypothetical protein. (217 aa)
BRM9_0049Hypothetical protein. (212 aa)
BRM9_0072ABC transporter permease protein. (397 aa)
mthKPotassium uptake protein TrkA family. (337 aa)
BRM9_0104Cation-transporting P-type ATPase. (910 aa)
arsAArsenite-activated ATPase ArsA. (321 aa)
BRM9_0123Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein. (248 aa)
BRM9_0124Nitrate/sulfonate/bicarbonate ABC transporter permease protein. (245 aa)
BRM9_0125Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. (317 aa)
copAHeavy metal translocating P-type ATPase. (814 aa)
fdhCFormate/nitrite transporter FdhC; May act as a formate transporter; Belongs to the FNT transporter (TC 2.A.44) family. (280 aa)
BRM9_0185MFS transporter. (497 aa)
BRM9_0187Tungstate ABC transporter permease protein. (263 aa)
BRM9_0206Iron ABC transporter ATP-binding protein. (258 aa)
BRM9_0207Iron ABC transporter permease protein. (340 aa)
ehbAEnergy-converting hydrogenase B subunit A EhbA. (103 aa)
ehbBEnergy-converting hydrogenase B subunit B EhbB. (89 aa)
ehbCEnergy-converting hydrogenase B subunit C EhbC. (90 aa)
ehbEEnergy-converting hydrogenase B subunit E EhbE. (120 aa)
ehbFEnergy-converting hydrogenase B subunit F EhbF. (501 aa)
ehbHEnergy-converting hydrogenase B subunit H EhbH. (92 aa)
ehbIEnergy-converting hydrogenase B subunit I EhbI. (165 aa)
ehbOEnergy-converting hydrogenase B subunit O EhbO. (329 aa)
BRM9_0251Potassium uptake protein TrkH family. (495 aa)
BRM9_0322Hypothetical protein. (358 aa)
secYPreprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (447 aa)
BRM9_0422Transporter Na+/H+ antiporter family. (409 aa)
BRM9_0425MFS transporter. (493 aa)
BRM9_0474Cation-transporting P-type ATPase. (853 aa)
BRM9_0482Phosphate transporter family protein. (326 aa)
BRM9_0495ABC transporter permease protein. (422 aa)
BRM9_0516Transporter SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (532 aa)
sulPSulfate permease SulP. (560 aa)
BRM9_0534Transporter SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (534 aa)
BRM9_0558Mechanosensitive ion channel protein. (254 aa)
BRM9_0568Divalent cation transporter mgtE family. (449 aa)
BRM9_0570TrkA domain-containing protein. (201 aa)
BRM9_0583Hypothetical protein. (193 aa)
aqpMTransporter MIP family. (250 aa)
amt1Ammonium transporter Amt1. (410 aa)
amt2Ammonium transporter Amt2. (408 aa)
BRM9_0681Polysaccharide/polyol phosphate ABC transporter ATP-binding protein. (248 aa)
BRM9_0682Polysaccharide/polyol phosphate ABC transporter permease protein. (266 aa)
BRM9_0734DMT family transporter. (304 aa)
pstBPhosphate transport system ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (251 aa)
pstAPhosphate ABC transporter permease protein PstA. (282 aa)
pstCPhosphate ABC transporter permease protein PstC. (291 aa)
pstS1Phosphate ABC transporter phosphate-binding protein PstS1. (268 aa)
pstS2Phosphate ABC transporter phosphate-binding protein PstS2. (281 aa)
ahaIA1A0 archaeal ATP synthase subunit I AhaI; Belongs to the V-ATPase 116 kDa subunit family. (670 aa)
ahaKA1A0 archaeal ATP synthase subunit K AhaK; Belongs to the V-ATPase proteolipid subunit family. (160 aa)
atpEA1A0 archaeal ATP synthase subunit E AhaE; Produces ATP from ADP in the presence of a proton gradient across the membrane. (207 aa)
ahaCA1A0 archaeal ATP synthase subunit C AhaC; Produces ATP from ADP in the presence of a proton gradient across the membrane. (385 aa)
ahaFA1A0 archaeal ATP synthase subunit F AhaF; Produces ATP from ADP in the presence of a proton gradient across the membrane. (104 aa)
ahaAA1A0 archaeal ATP synthase subunit A AhaA; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (584 aa)
ahaBA1A0 archaeal ATP synthase subunit B AhaB; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. (463 aa)
ahaDA1A0 archaeal ATP synthase subunit D AhaD; Produces ATP from ADP in the presence of a proton gradient across the membrane. (219 aa)
BRM9_0849Transporter CDF family. (460 aa)
BRM9_0851Ion transport protein. (255 aa)
BRM9_0855ABC transporter permease protein. (254 aa)
BRM9_0866Transporter. (300 aa)
BRM9_0873Voltage gated chloride channel family protein. (574 aa)
BRM9_0874Sodium/hydrogen exchanger family/TrkA domain-containing protein. (652 aa)
sufCFeS assembly ATPase SufC. (257 aa)
BRM9_0924K+-dependent Na+/Ca+ exchanger. (314 aa)
BRM9_0942Transporter CDF family. (414 aa)
secDProtein export membrane protein SecD; Involved in protein export. (401 aa)
secFProtein export membrane protein SecF; Involved in protein export. (280 aa)
mntPHypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. (180 aa)
BRM9_1057Zinc ABC transporter ATP-binding protein. (248 aa)
Your Current Organism:
Methanobacterium formicicum
NCBI taxonomy Id: 2162
Other names: ATCC 33274, JCM 10132, M. formicicum, Methanobacterium sp. BRM9, NBRC 100475, OCM 55, strain MF
Server load: low (16%) [HD]