STRINGSTRING
mvhD mvhD mtd mtd fdhB fdhB fdhA fdhA fdhC fdhC frhB frhB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mvhDMethyl viologen-reducing hydrogenase delta subunit MvhD. (148 aa)
mtdF420-dependent methylenetetrahydromethanopterin dehydrogenase Mtd; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT. (276 aa)
fdhBFormate dehydrogenase beta subunit FdhB; Catalyzes the oxidation of formate; Belongs to the FrhB family. (399 aa)
fdhAFormate dehydrogenase alpha subunit FdhA; Catalyzes the oxidation of formate. (684 aa)
fdhCFormate/nitrite transporter FdhC; May act as a formate transporter; Belongs to the FNT transporter (TC 2.A.44) family. (280 aa)
frhBCoenzyme F420 hydrogenase beta subunit FrhB. (294 aa)
Your Current Organism:
Methanobacterium formicicum
NCBI taxonomy Id: 2162
Other names: ATCC 33274, JCM 10132, M. formicicum, Methanobacterium sp. BRM9, NBRC 100475, OCM 55, strain MF
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