STRINGSTRING
cysS cysS sdaA sdaA cysE_1 cysE_1 BZ172_02930 BZ172_02930 cysM cysM BZ172_05590 BZ172_05590 tdcG tdcG BZ172_09535 BZ172_09535 cysE_4 cysE_4 serB serB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cysSUnannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (461 aa)
sdaAUnannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. (454 aa)
cysE_1Unannotated protein; Belongs to the transferase hexapeptide repeat family. (162 aa)
BZ172_02930Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. (323 aa)
cysMUnannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. (303 aa)
BZ172_05590Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. (455 aa)
tdcGUnannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. (454 aa)
BZ172_09535Unannotated protein. (45 aa)
cysE_4Unannotated protein; Belongs to the transferase hexapeptide repeat family. (273 aa)
serBUnannotated protein. (322 aa)
Your Current Organism:
Shigella sonnei
NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G
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