11 items (Shigella sonnei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BZ172_19185	Unannotated protein. (302 aa)
	hisJ	Unannotated protein; Belongs to the bacterial solute-binding protein 3 family. (260 aa)
	argT	Unannotated protein; Belongs to the bacterial solute-binding protein 3 family. (260 aa)
	ygeW	Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (395 aa)
	argR	Unannotated protein; Regulates arginine biosynthesis genes. (156 aa)
	gltI	Unannotated protein; Belongs to the bacterial solute-binding protein 3 family. (254 aa)
	GCA_000283715_03838	Unannotated protein. (93 aa)
	livK	Unannotated protein. (369 aa)
	livJ	Unannotated protein. (367 aa)
	pyrB	Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (311 aa)
	argI	Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (334 aa)

Your Current Organism:

Shigella sonnei

NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GCA_000283715_03838	gltI	GCA_000283715_03838	GCA_000283715_03837	Unannotated protein.	Unannotated protein; Belongs to the bacterial solute-binding protein 3 family.	0.994
argI	argR	GCA_000283715_04991	GCA_000283715_03807	Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	Unannotated protein; Regulates arginine biosynthesis genes.	0.750
argI	pyrB	GCA_000283715_04991	GCA_000283715_04981	Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.646
argR	argI	GCA_000283715_03807	GCA_000283715_04991	Unannotated protein; Regulates arginine biosynthesis genes.	Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	0.750
argR	ygeW	GCA_000283715_03807	GCA_000283715_03434	Unannotated protein; Regulates arginine biosynthesis genes.	Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.750
argT	hisJ	GCA_000283715_02669	GCA_000283715_02668	Unannotated protein; Belongs to the bacterial solute-binding protein 3 family.	Unannotated protein; Belongs to the bacterial solute-binding protein 3 family.	0.443
gltI	GCA_000283715_03838	GCA_000283715_03837	GCA_000283715_03838	Unannotated protein; Belongs to the bacterial solute-binding protein 3 family.	Unannotated protein.	0.994
hisJ	argT	GCA_000283715_02668	GCA_000283715_02669	Unannotated protein; Belongs to the bacterial solute-binding protein 3 family.	Unannotated protein; Belongs to the bacterial solute-binding protein 3 family.	0.443
livJ	livK	GCA_000283715_04035	GCA_000283715_04033	Unannotated protein.	Unannotated protein.	0.985
livK	livJ	GCA_000283715_04033	GCA_000283715_04035	Unannotated protein.	Unannotated protein.	0.985
pyrB	argI	GCA_000283715_04981	GCA_000283715_04991	Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	0.646
pyrB	ygeW	GCA_000283715_04981	GCA_000283715_03434	Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.624
ygeW	argR	GCA_000283715_03434	GCA_000283715_03807	Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	Unannotated protein; Regulates arginine biosynthesis genes.	0.750
ygeW	pyrB	GCA_000283715_03434	GCA_000283715_04981	Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.624