(8 nodes) Rhamnose metabolic process network (Shigella sonnei)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

Your Input:
	rhaB	Unannotated protein; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. (489 aa)
	rhaS	Unannotated protein; Activates expression of the rhaBAD and rhaT operons. (278 aa)
	GCA_000283715_04557	Unannotated protein. (312 aa)
	BZ172_15230	Unannotated protein. (84 aa)
	btr	Unannotated protein. (220 aa)
	rhaM	Unannotated protein; Involved in the anomeric conversion of L-rhamnose. (104 aa)
	rhaD	Unannotated protein; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily. (274 aa)
	rhaA	Unannotated protein. (419 aa)

Your Current Organism:

Shigella sonnei

NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BZ172_15230	btr	GCA_000283715_05063	GCA_000283715_05060	Unannotated protein.	Unannotated protein.	0.952
GCA_000283715_04557	btr	GCA_000283715_04557	GCA_000283715_05060	Unannotated protein.	Unannotated protein.	0.603
GCA_000283715_04557	rhaA	GCA_000283715_04557	GCA_000283715_04554	Unannotated protein.	Unannotated protein.	0.679
GCA_000283715_04557	rhaB	GCA_000283715_04557	GCA_000283715_04555	Unannotated protein.	Unannotated protein; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.	0.817
GCA_000283715_04557	rhaD	GCA_000283715_04557	GCA_000283715_04553	Unannotated protein.	Unannotated protein; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily.	0.564
GCA_000283715_04557	rhaM	GCA_000283715_04557	GCA_000283715_04552	Unannotated protein.	Unannotated protein; Involved in the anomeric conversion of L-rhamnose.	0.494
GCA_000283715_04557	rhaS	GCA_000283715_04557	GCA_000283715_04556	Unannotated protein.	Unannotated protein; Activates expression of the rhaBAD and rhaT operons.	0.869
btr	BZ172_15230	GCA_000283715_05060	GCA_000283715_05063	Unannotated protein.	Unannotated protein.	0.952
btr	GCA_000283715_04557	GCA_000283715_05060	GCA_000283715_04557	Unannotated protein.	Unannotated protein.	0.603
btr	rhaS	GCA_000283715_05060	GCA_000283715_04556	Unannotated protein.	Unannotated protein; Activates expression of the rhaBAD and rhaT operons.	0.551
rhaA	GCA_000283715_04557	GCA_000283715_04554	GCA_000283715_04557	Unannotated protein.	Unannotated protein.	0.679
rhaA	rhaB	GCA_000283715_04554	GCA_000283715_04555	Unannotated protein.	Unannotated protein; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.	0.997
rhaA	rhaD	GCA_000283715_04554	GCA_000283715_04553	Unannotated protein.	Unannotated protein; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily.	0.905
rhaA	rhaM	GCA_000283715_04554	GCA_000283715_04552	Unannotated protein.	Unannotated protein; Involved in the anomeric conversion of L-rhamnose.	0.993
rhaA	rhaS	GCA_000283715_04554	GCA_000283715_04556	Unannotated protein.	Unannotated protein; Activates expression of the rhaBAD and rhaT operons.	0.600
rhaB	GCA_000283715_04557	GCA_000283715_04555	GCA_000283715_04557	Unannotated protein; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.	Unannotated protein.	0.817
rhaB	rhaA	GCA_000283715_04555	GCA_000283715_04554	Unannotated protein; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.	Unannotated protein.	0.997
rhaB	rhaD	GCA_000283715_04555	GCA_000283715_04553	Unannotated protein; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.	Unannotated protein; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily.	0.993
rhaB	rhaM	GCA_000283715_04555	GCA_000283715_04552	Unannotated protein; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.	Unannotated protein; Involved in the anomeric conversion of L-rhamnose.	0.948
rhaB	rhaS	GCA_000283715_04555	GCA_000283715_04556	Unannotated protein; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.	Unannotated protein; Activates expression of the rhaBAD and rhaT operons.	0.639