STRINGSTRING
fucU fucU GCA_000283715_03366 GCA_000283715_03366 fucA_1 fucA_1 fucO fucO BZ172_05590 BZ172_05590 hycB hycB hycD hycD hyfE hyfE hyfC hyfC GCA_000283715_01946 GCA_000283715_01946 gapC gapC ppsA ppsA gapA gapA sdaA sdaA zwf zwf GCA_000283715_01343 GCA_000283715_01343 GCA_000283715_01342 GCA_000283715_01342 BZ172_23465 BZ172_23465 GCA_000283715_00946 GCA_000283715_00946 pflA pflA fsaA fsaA hpdA_2 hpdA_2 csdB csdB pgl pgl galE galE galT galT galK galK galM galM gpmA gpmA GCA_000283715_00704 GCA_000283715_00704 fbp fbp btr btr BZ172_15230 BZ172_15230 csdA_2 csdA_2 rhaS rhaS rhaB rhaB rhaA rhaA rhaD rhaD rhaM rhaM gpmM gpmM pckA pckA pflB1 pflB1 tdcG tdcG fucK fucK GCA_000283715_04652 GCA_000283715_04652 GCA_000283715_04653 GCA_000283715_04653 hpdA_1 hpdA_1 pgi pgi fsaB fsaB BZ172_12770 BZ172_12770 tpiA tpiA GCA_000283715_04557 GCA_000283715_04557
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fucUUnannotated protein; Involved in the anomeric conversion of L-fucose. (140 aa)
GCA_000283715_03366Unannotated protein. (591 aa)
fucA_1Unannotated protein; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. (215 aa)
fucOUnannotated protein. (382 aa)
BZ172_05590Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. (455 aa)
hycBUnannotated protein. (203 aa)
hycDUnannotated protein. (307 aa)
hyfEUnannotated protein. (216 aa)
hyfCUnannotated protein. (315 aa)
GCA_000283715_01946Unannotated protein. (64 aa)
gapCUnannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (284 aa)
ppsAUnannotated protein; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (792 aa)
gapAUnannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (331 aa)
sdaAUnannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. (454 aa)
zwfUnannotated protein; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (491 aa)
GCA_000283715_01343Unannotated protein. (461 aa)
GCA_000283715_01342Unannotated protein. (102 aa)
BZ172_23465Unannotated protein. (416 aa)
GCA_000283715_00946Unannotated protein. (760 aa)
pflAUnannotated protein; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. (246 aa)
fsaAUnannotated protein; Catalyzes the reversible formation of fructose 6-phosphate from dihydroxyacetone and D-glyceraldehyde 3-phosphate via an aldolization reaction; Belongs to the transaldolase family. Type 3A subfamily. (220 aa)
hpdA_2Unannotated protein. (299 aa)
csdBUnannotated protein. (810 aa)
pglUnannotated protein; Catalyzes the hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate. (331 aa)
galEUnannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (338 aa)
galTUnannotated protein; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family. (348 aa)
galKUnannotated protein; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (382 aa)
galMUnannotated protein; Converts alpha-aldose to the beta-anomer. (346 aa)
gpmAUnannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (250 aa)
GCA_000283715_00704Unannotated protein. (877 aa)
fbpUnannotated protein; Belongs to the FBPase class 1 family. (332 aa)
btrUnannotated protein. (220 aa)
BZ172_15230Unannotated protein. (84 aa)
csdA_2Unannotated protein. (287 aa)
rhaSUnannotated protein; Activates expression of the rhaBAD and rhaT operons. (278 aa)
rhaBUnannotated protein; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. (489 aa)
rhaAUnannotated protein. (419 aa)
rhaDUnannotated protein; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily. (274 aa)
rhaMUnannotated protein; Involved in the anomeric conversion of L-rhamnose. (104 aa)
gpmMUnannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (514 aa)
pckAUnannotated protein; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (540 aa)
pflB1Unannotated protein. (764 aa)
tdcGUnannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. (454 aa)
fucKUnannotated protein; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. (472 aa)
GCA_000283715_04652Unannotated protein. (661 aa)
GCA_000283715_04653Unannotated protein. (116 aa)
hpdA_1Unannotated protein. (292 aa)
pgiUnannotated protein; Belongs to the GPI family. (549 aa)
fsaBUnannotated protein; Catalyzes the reversible formation of fructose 6-phosphate from dihydroxyacetone and D-glyceraldehyde 3-phosphate via an aldolization reaction; Belongs to the transaldolase family. Type 3A subfamily. (220 aa)
BZ172_12770Unannotated protein. (373 aa)
tpiAUnannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (255 aa)
GCA_000283715_04557Unannotated protein. (312 aa)
Your Current Organism:
Shigella sonnei
NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.