STRINGSTRING
yehC yehC BZ172_19185 BZ172_19185 papD_1 papD_1 ygbF ygbF modA modA glnH glnH gsiB gsiB yliI yliI GCA_000283715_00878 GCA_000283715_00878 artJ artJ artI artI dmsA_1 dmsA_1 BZ172_21145 BZ172_21145 ycbR ycbR BZ172_21280 BZ172_21280 appA_2 appA_2 agp agp csgG csgG flgI flgI BZ172_22625 BZ172_22625 BZ172_22890 BZ172_22890 prc prc GCA_000283715_01749 GCA_000283715_01749 marB marB dcp dcp GCA_000283715_01807 GCA_000283715_01807 BZ172_26105 BZ172_26105 BZ172_27275 BZ172_27275 pspE pspE BZ172_27530 BZ172_27530 BZ172_28005 BZ172_28005 BZ172_28175 BZ172_28175 ybcL ybcL zinT zinT mglB mglB appA_1 appA_1 dsbE dsbE hisJ hisJ argT argT mepA mepA GCA_000283715_02695 GCA_000283715_02695 BZ172_03040 BZ172_03040 BZ172_03620 BZ172_03620 BZ172_03845 BZ172_03845 BZ172_04975 BZ172_04975 iap iap BZ172_06540 BZ172_06540 sufI sufI BZ172_06995 BZ172_06995 GCA_000283715_03677 GCA_000283715_03677 GCA_000283715_03712 GCA_000283715_03712 gltI gltI GCA_000283715_03838 GCA_000283715_03838 ggt ggt nikA nikA hdeA hdeA BZ172_10785 BZ172_10785 dppA_1 dppA_1 BZ172_11545 BZ172_11545 GCA_000283715_04384 GCA_000283715_04384 GCA_000283715_04385 GCA_000283715_04385 aphA aphA BZ172_13820 BZ172_13820 ampC ampC amiB amiB BZ172_14560 BZ172_14560 ytfQ ytfQ fecB fecB BZ172_29915 BZ172_29915 GCA_000283715_05181 GCA_000283715_05181 surA surA tbpA tbpA yabN yabN BZ172_16310 BZ172_16310 ecpD ecpD fhuD fhuD sgrR sgrR rna rna
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yehCUnannotated protein. (224 aa)
BZ172_19185Unannotated protein. (302 aa)
papD_1Unannotated protein. (243 aa)
ygbFUnannotated protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (263 aa)
modAUnannotated protein. (257 aa)
glnHUnannotated protein; Belongs to the bacterial solute-binding protein 3 family. (248 aa)
gsiBUnannotated protein. (512 aa)
yliIUnannotated protein. (371 aa)
GCA_000283715_00878Unannotated protein. (400 aa)
artJUnannotated protein; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
artIUnannotated protein; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
dmsA_1Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (814 aa)
BZ172_21145Unannotated protein. (182 aa)
ycbRUnannotated protein. (233 aa)
BZ172_21280Unannotated protein. (229 aa)
appA_2Unannotated protein. (432 aa)
agpUnannotated protein. (413 aa)
csgGUnannotated protein. (277 aa)
flgIUnannotated protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (365 aa)
BZ172_22625Unannotated protein. (109 aa)
BZ172_22890Unannotated protein; Belongs to the bacterial solute-binding protein 3 family. (285 aa)
prcUnannotated protein; Belongs to the peptidase S41A family. (682 aa)
GCA_000283715_01749Unannotated protein. (115 aa)
marBUnannotated protein. (72 aa)
dcpUnannotated protein. (681 aa)
GCA_000283715_01807Unannotated protein. (798 aa)
BZ172_26105Unannotated protein. (516 aa)
BZ172_27275Unannotated protein. (537 aa)
pspEUnannotated protein. (104 aa)
BZ172_27530Unannotated protein. (547 aa)
BZ172_28005Unannotated protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (251 aa)
BZ172_28175Unannotated protein. (558 aa)
ybcLUnannotated protein. (183 aa)
zinTUnannotated protein. (223 aa)
mglBUnannotated protein. (332 aa)
appA_1Unannotated protein. (604 aa)
dsbEUnannotated protein. (185 aa)
hisJUnannotated protein; Belongs to the bacterial solute-binding protein 3 family. (260 aa)
argTUnannotated protein; Belongs to the bacterial solute-binding protein 3 family. (260 aa)
mepAUnannotated protein; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus. Belongs to the peptidase M74 family. (274 aa)
GCA_000283715_02695Unannotated protein. (203 aa)
BZ172_03040Unannotated protein. (289 aa)
BZ172_03620Unannotated protein. (327 aa)
BZ172_03845Unannotated protein. (258 aa)
BZ172_04975Unannotated protein. (396 aa)
iapUnannotated protein. (345 aa)
BZ172_06540Unannotated protein. (328 aa)
sufIUnannotated protein; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress; Belongs to the FtsP family. (470 aa)
BZ172_06995Unannotated protein. (249 aa)
GCA_000283715_03677Unannotated protein. (238 aa)
GCA_000283715_03712Unannotated protein. (170 aa)
gltIUnannotated protein; Belongs to the bacterial solute-binding protein 3 family. (254 aa)
GCA_000283715_03838Unannotated protein. (93 aa)
ggtUnannotated protein. (499 aa)
nikAUnannotated protein. (524 aa)
hdeAUnannotated protein; Required for optimal acid stress protection. Exhibits a chaperone-like activity only at low pH by suppressing non-specifically the aggregation of denaturated periplasmic proteins. Belongs to the HdeA family. (110 aa)
BZ172_10785Unannotated protein. (419 aa)
dppA_1Unannotated protein. (535 aa)
BZ172_11545Unannotated protein. (243 aa)
GCA_000283715_04384Unannotated protein. (193 aa)
GCA_000283715_04385Unannotated protein. (99 aa)
aphAUnannotated protein; Belongs to the class B bacterial acid phosphatase family. (237 aa)
BZ172_13820Unannotated protein. (661 aa)
ampCUnannotated protein. (377 aa)
amiBUnannotated protein. (445 aa)
BZ172_14560Unannotated protein. (323 aa)
ytfQUnannotated protein. (318 aa)
fecBUnannotated protein. (300 aa)
BZ172_29915Unannotated protein. (246 aa)
GCA_000283715_05181Unannotated protein. (260 aa)
surAUnannotated protein; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (428 aa)
tbpAUnannotated protein. (327 aa)
yabNUnannotated protein; Activates the small RNA gene sgrS under glucose-phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding these molecules in its C-terminal solute-binding domain. (551 aa)
BZ172_16310Unannotated protein. (796 aa)
ecpDUnannotated protein. (246 aa)
fhuDUnannotated protein. (296 aa)
sgrRUnannotated protein. (566 aa)
rnaUnannotated protein; Belongs to the RNase T2 family. (268 aa)
Your Current Organism:
Shigella sonnei
NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G
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