STRINGSTRING
sufD sufD GCA_000283715_05180 GCA_000283715_05180 rsmC rsmC GCA_000283715_05041 GCA_000283715_05041 GCA_000283715_05039 GCA_000283715_05039 GCA_000283715_05037 GCA_000283715_05037 GCA_000283715_05036 GCA_000283715_05036 mpl mpl rlmB_1 rlmB_1 rsgA rsgA frdC frdC dipZ dipZ nrfG nrfG nrfF nrfF BZ172_13765 BZ172_13765 alr alr rluF rluF murB murB murI murI ftsN ftsN zapB zapB fpr fpr typA typA yihI yihI engB engB cyaY cyaY BZ172_11565 BZ172_11565 gidB gidB glmU_1 glmU_1 secB secB rph rph yicC yicC GCA_000283715_04114 GCA_000283715_04114 yhiR yhiR rsmJ rsmJ rsmD rsmD gntY gntY mrcA mrcA BZ172_09045 BZ172_09045 rsmB rsmB argR argR mtgA mtgA lptA lptA yrbK yrbK BZ172_07975 BZ172_07975 murA murA obgE obgE yhbY yhbY rrmJ rrmJ rimP rimP rbfA rbfA deaD deaD yraM yraM rsmI rsmI fimD_7 fimD_7 BZ172_07445 BZ172_07445 ygjO ygjO bacA bacA BZ172_06970 BZ172_06970 BZ172_07375 BZ172_07375 yqgF yqgF yggJ yggJ zapA zapA csdA_1 csdA_1 rlmM rlmM rumA rumA BZ172_05080 BZ172_05080 BZ172_15700 BZ172_15700 ksgA ksgA surA surA imp imp mraW mraW ftsI ftsI murE murE murF murF mraY mraY murD murD ftsW ftsW murG murG murC murC ddl_1 ddl_1 ftsQ ftsQ ftsZ ftsZ yacF yacF ppdD ppdD BZ172_16465 BZ172_16465 GCA_000283715_00152 GCA_000283715_00152 GCA_000283715_00153 GCA_000283715_00153 hrpB hrpB mrcB mrcB yadR yadR yaeS yaeS yaeT yaeT BZ172_17105 BZ172_17105 ddl_2 ddl_2 GCA_000283715_00522 GCA_000283715_00522 GCA_000283715_00523 GCA_000283715_00523 BZ172_19070 BZ172_19070 mrdB mrdB mrdA mrdA rlmH rlmH ybeB ybeB lptE lptE ybeY ybeY GCA_000283715_00689 GCA_000283715_00689 GCA_000283715_00690 GCA_000283715_00690 ygbF ygbF rhlE rhlE rlmF rlmF ybiS ybiS GCA_000283715_00878 GCA_000283715_00878 ybjG ybjG BZ172_20580 BZ172_20580 rumB rumB ycbB ycbB BZ172_21255 BZ172_21255 GCA_000283715_00992 GCA_000283715_00992 GCA_000283715_00993 GCA_000283715_00993 zapC zapC rlmL rlmL sulA sulA GCA_000283715_01020 GCA_000283715_01020 GCA_000283715_01021 GCA_000283715_01021 GCA_000283715_01022 GCA_000283715_01022 csgG csgG csgF csgF csgE csgE rimJ rimJ mviN mviN flgN flgN flgA flgA flgJ flgJ flgK flgK rne rne rluC rluC BZ172_22320 BZ172_22320 yceG yceG lpoB lpoB nagZ nagZ GCA_000283715_01176 GCA_000283715_01176 minD_2 minD_2 minC minC ldcA ldcA flhD flhD GCA_000283715_01281 GCA_000283715_01281 flhB flhB GCA_000283715_01285 GCA_000283715_01285 cutC cutC rsmF rsmF mipA mipA osmE osmE rplT rplT sufA sufA ynhE ynhE sufC sufC rimM rimM BZ172_04500 BZ172_04500 smpA smpA yfiO yfiO rluD rluD srmB srmB rnc rnc era era yfhO yfhO iscU iscU iscA iscA hscB hscB hscA hscA iscX iscX pbpC pbpC rlmN rlmN yfgL yfgL engA engA BZ172_03290 BZ172_03290 nlpB nlpB zipA zipA GCA_000283715_02697 GCA_000283715_02697 BZ172_02210 BZ172_02210 ccmA ccmA ccmB ccmB ccmC ccmC ccmD ccmD ccmE ccmE ccmF ccmF dsbE dsbE ccmH ccmH rsuA rsuA yeiU yeiU BZ172_00975 BZ172_00975 minD_3 minD_3 htrE_3 htrE_3 BZ172_00765 BZ172_00765 GCA_000283715_02336 GCA_000283715_02336 fliR fliR fliQ fliQ fliK fliK fliI fliI fliS fliS narJ narJ yciV yciV rluB rluB dbpA dbpA hrpA hrpA ydcF ydcF narW narW GCA_000283715_01745 GCA_000283715_01745 grxD grxD ynhG ynhG sufE sufE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sufDUnannotated protein. (423 aa)
GCA_000283715_05180Unannotated protein. (812 aa)
rsmCUnannotated protein; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family. (343 aa)
GCA_000283715_05041Unannotated protein. (256 aa)
GCA_000283715_05039Unannotated protein. (298 aa)
GCA_000283715_05037Unannotated protein. (145 aa)
GCA_000283715_05036Unannotated protein. (58 aa)
mplUnannotated protein; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily. (457 aa)
rlmB_1Unannotated protein; Specifically methylates the ribose of guanosine 2251 in 23S rRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily. (243 aa)
rsgAUnannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (350 aa)
frdCUnannotated protein; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (131 aa)
dipZUnannotated protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. (565 aa)
nrfGUnannotated protein. (198 aa)
nrfFUnannotated protein; Possible subunit of a heme lyase. (127 aa)
BZ172_13765Unannotated protein. (540 aa)
alrUnannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. (359 aa)
rluFUnannotated protein; Belongs to the pseudouridine synthase RsuA family. (290 aa)
murBUnannotated protein; Cell wall formation. (342 aa)
murIUnannotated protein; Provides the (R)-glutamate required for cell wall biosynthesis. (285 aa)
ftsNUnannotated protein; Essential cell division protein that activates septal peptidoglycan synthesis and constriction of the cell. Acts on both sides of the membrane, via interaction with FtsA in the cytoplasm and interaction with the FtsQBL complex in the periplasm. These interactions may induce a conformational switch in both FtsA and FtsQBL, leading to septal peptidoglycan synthesis by FtsI and associated synthases. (284 aa)
zapBUnannotated protein; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA. (79 aa)
fprUnannotated protein. (248 aa)
typAUnannotated protein. (607 aa)
yihIUnannotated protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family. (169 aa)
engBUnannotated protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. (210 aa)
cyaYUnannotated protein; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis. (106 aa)
BZ172_11565Unannotated protein. (840 aa)
gidBUnannotated protein; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. (207 aa)
glmU_1Unannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (456 aa)
secBUnannotated protein; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. (155 aa)
rphUnannotated protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (238 aa)
yicCUnannotated protein. (287 aa)
GCA_000283715_04114Unannotated protein. (188 aa)
yhiRUnannotated protein; Specifically methylates the adenine in position 2030 of 23S rRNA. (280 aa)
rsmJUnannotated protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. (250 aa)
rsmDUnannotated protein; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family. (198 aa)
gntYUnannotated protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. (191 aa)
mrcAUnannotated protein. (850 aa)
BZ172_09045Unannotated protein. (179 aa)
rsmBUnannotated protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. (429 aa)
argRUnannotated protein; Regulates arginine biosynthesis genes. (156 aa)
mtgAUnannotated protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (242 aa)
lptAUnannotated protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. (185 aa)
yrbKUnannotated protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family. (191 aa)
BZ172_07975Unannotated protein; Belongs to the BolA/IbaG family. (89 aa)
murAUnannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (419 aa)
obgEUnannotated protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (390 aa)
yhbYUnannotated protein. (97 aa)
rrmJUnannotated protein; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. (209 aa)
rimPUnannotated protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. (150 aa)
rbfAUnannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (133 aa)
deaDUnannotated protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. (629 aa)
yraMUnannotated protein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family. (678 aa)
rsmIUnannotated protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (286 aa)
fimD_7Unannotated protein. (838 aa)
BZ172_07445Unannotated protein. (894 aa)
ygjOUnannotated protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. (378 aa)
bacAUnannotated protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (273 aa)
BZ172_06970Unannotated protein. (834 aa)
BZ172_07375Unannotated protein. (108 aa)
yqgFUnannotated protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (138 aa)
yggJUnannotated protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. (243 aa)
zapAUnannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. (109 aa)
csdA_1Unannotated protein. (401 aa)
rlmMUnannotated protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. (366 aa)
rumAUnannotated protein; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. (433 aa)
BZ172_05080Unannotated protein. (136 aa)
BZ172_15700Unannotated protein. (267 aa)
ksgAUnannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (273 aa)
surAUnannotated protein; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (428 aa)
impUnannotated protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (784 aa)
mraWUnannotated protein; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (313 aa)
ftsIUnannotated protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. (588 aa)
murEUnannotated protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (497 aa)
murFUnannotated protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (452 aa)
mraYUnannotated protein; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (360 aa)
murDUnannotated protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (438 aa)
ftsWUnannotated protein; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. (414 aa)
murGUnannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (355 aa)
murCUnannotated protein; Cell wall formation; Belongs to the MurCDEF family. (491 aa)
ddl_1Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (306 aa)
ftsQUnannotated protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. (276 aa)
ftsZUnannotated protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (383 aa)
yacFUnannotated protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. (247 aa)
ppdDUnannotated protein. (146 aa)
BZ172_16465Unannotated protein. (329 aa)
GCA_000283715_00152Unannotated protein. (303 aa)
GCA_000283715_00153Unannotated protein. (105 aa)
hrpBUnannotated protein. (809 aa)
mrcBUnannotated protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). (844 aa)
yadRUnannotated protein; Required for insertion of 4Fe-4S clusters for at least IspG. (114 aa)
yaeSUnannotated protein; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide. (252 aa)
yaeTUnannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery. (810 aa)
BZ172_17105Unannotated protein. (246 aa)
ddl_2Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (364 aa)
GCA_000283715_00522Unannotated protein. (87 aa)
GCA_000283715_00523Unannotated protein. (517 aa)
BZ172_19070Unannotated protein; Belongs to the peptidase S11 family. (427 aa)
mrdBUnannotated protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. (370 aa)
mrdAUnannotated protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. (633 aa)
rlmHUnannotated protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. (155 aa)
ybeBUnannotated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. (105 aa)
lptEUnannotated protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. (193 aa)
ybeYUnannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (155 aa)
GCA_000283715_00689Unannotated protein. (334 aa)
GCA_000283715_00690Unannotated protein. (489 aa)
ygbFUnannotated protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (263 aa)
rhlEUnannotated protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. (454 aa)
rlmFUnannotated protein; Specifically methylates the adenine in position 1618 of 23S rRNA. (308 aa)
ybiSUnannotated protein. (306 aa)
GCA_000283715_00878Unannotated protein. (400 aa)
ybjGUnannotated protein. (198 aa)
BZ172_20580Unannotated protein. (158 aa)
rumBUnannotated protein; Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmC subfamily. (375 aa)
ycbBUnannotated protein. (615 aa)
BZ172_21255Unannotated protein. (383 aa)
GCA_000283715_00992Unannotated protein. (220 aa)
GCA_000283715_00993Unannotated protein. (260 aa)
zapCUnannotated protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ. (180 aa)
rlmLUnannotated protein; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. (702 aa)
sulAUnannotated protein; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. (169 aa)
GCA_000283715_01020Unannotated protein. (98 aa)
GCA_000283715_01021Unannotated protein. (128 aa)
GCA_000283715_01022Unannotated protein. (86 aa)
csgGUnannotated protein. (277 aa)
csgFUnannotated protein. (138 aa)
csgEUnannotated protein. (129 aa)
rimJUnannotated protein. (194 aa)
mviNUnannotated protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (511 aa)
flgNUnannotated protein. (138 aa)
flgAUnannotated protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (219 aa)
flgJUnannotated protein. (313 aa)
flgKUnannotated protein. (547 aa)
rneUnannotated protein; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. (1061 aa)
rluCUnannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (319 aa)
BZ172_22320Unannotated protein. (173 aa)
yceGUnannotated protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. (340 aa)
lpoBUnannotated protein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). Belongs to the LpoB family. (213 aa)
nagZUnannotated protein; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (341 aa)
GCA_000283715_01176Unannotated protein. (272 aa)
minD_2Unannotated protein. (270 aa)
minCUnannotated protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. (231 aa)
ldcAUnannotated protein. (304 aa)
flhDUnannotated protein; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family. (116 aa)
GCA_000283715_01281Unannotated protein. (126 aa)
flhBUnannotated protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (323 aa)
GCA_000283715_01285Unannotated protein. (692 aa)
cutCUnannotated protein; Participates in the control of copper homeostasis. (248 aa)
rsmFUnannotated protein; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. (506 aa)
mipAUnannotated protein. (248 aa)
osmEUnannotated protein. (112 aa)
rplTUnannotated protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (118 aa)
sufAUnannotated protein; Belongs to the HesB/IscA family. (122 aa)
ynhEUnannotated protein. (495 aa)
sufCUnannotated protein. (248 aa)
rimMUnannotated protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (182 aa)
BZ172_04500Unannotated protein. (288 aa)
smpAUnannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (113 aa)
yfiOUnannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamA, the core component of the assembly machinery. (245 aa)
rluDUnannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (326 aa)
srmBUnannotated protein; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. (444 aa)
rncUnannotated protein; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (226 aa)
eraUnannotated protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. (301 aa)
yfhOUnannotated protein; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur and selenium atoms from cysteine and selenocysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. Also functions as a selenium delivery protein in the pathway for the biosynthesis of selenophosphate. (404 aa)
iscUUnannotated protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. (128 aa)
iscAUnannotated protein; Is able to transfer iron-sulfur clusters to apo-ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system TrxA/TrxB. (107 aa)
hscBUnannotated protein; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. (171 aa)
hscAUnannotated protein; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. Involved in the maturation of IscU. (616 aa)
iscXUnannotated protein. (66 aa)
pbpCUnannotated protein. (770 aa)
rlmNUnannotated protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. (384 aa)
yfgLUnannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (392 aa)
engAUnannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (490 aa)
BZ172_03290Unannotated protein. (137 aa)
nlpBUnannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (344 aa)
zipAUnannotated protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. (328 aa)
GCA_000283715_02697Unannotated protein. (245 aa)
BZ172_02210Unannotated protein. (597 aa)
ccmAUnannotated protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (205 aa)
ccmBUnannotated protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. (220 aa)
ccmCUnannotated protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. (245 aa)
ccmDUnannotated protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. (69 aa)
ccmEUnannotated protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. (159 aa)
ccmFUnannotated protein. (647 aa)
dsbEUnannotated protein. (185 aa)
ccmHUnannotated protein; Possible subunit of a heme lyase. (350 aa)
rsuAUnannotated protein; Belongs to the pseudouridine synthase RsuA family. (231 aa)
yeiUUnannotated protein; Involved in the modification of the lipid A domain of lipopolysaccharides (LPS). Transfers a phosphate group from undecaprenyl pyrophosphate (C55-PP) to lipid A to form lipid A 1- diphosphate. Contributes to the recycling of undecaprenyl phosphate (C55-P); Belongs to the LpxT phosphotransferase family. (237 aa)
BZ172_00975Unannotated protein; Belongs to the peptidase S11 family. (310 aa)
minD_3Unannotated protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (369 aa)
htrE_3Unannotated protein. (148 aa)
BZ172_00765Unannotated protein. (667 aa)
GCA_000283715_02336Unannotated protein. (311 aa)
fliRUnannotated protein; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (261 aa)
fliQUnannotated protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
fliKUnannotated protein. (375 aa)
fliIUnannotated protein. (457 aa)
fliSUnannotated protein. (136 aa)
narJUnannotated protein. (236 aa)
yciVUnannotated protein. (293 aa)
rluBUnannotated protein; Belongs to the pseudouridine synthase RsuA family. (290 aa)
dbpAUnannotated protein; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. (457 aa)
hrpAUnannotated protein. (1300 aa)
ydcFUnannotated protein. (226 aa)
narWUnannotated protein. (231 aa)
GCA_000283715_01745Unannotated protein. (208 aa)
grxDUnannotated protein; Belongs to the glutaredoxin family. Monothiol subfamily. (115 aa)
ynhGUnannotated protein. (334 aa)
sufEUnannotated protein; Participates in cysteine desulfuration mediated by SufS. Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L- alanine and constitutes an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Functions as a sulfur acceptor for SufS, by mediating the direct transfer of the sulfur atom from the S-sulfanylcysteine of SufS, an intermediate product of cysteine desulfuration process; Belongs to the SufE family. (138 aa)
Your Current Organism:
Shigella sonnei
NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G
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