STRINGSTRING
rplV rplV BZ172_02585 BZ172_02585 rpsT rpsT BZ172_16630 BZ172_16630 rpsB rpsB BZ172_19440 BZ172_19440 BZ172_17430 BZ172_17430 hupB hupB priC priC ybaB ybaB recR recR aes aes ybeS ybeS GCA_000283715_00674 GCA_000283715_00674 GCA_000283715_00723 GCA_000283715_00723 GCA_000283715_00758 GCA_000283715_00758 dnaC_3 dnaC_3 ybiI ybiI rarA rarA rpsA rpsA ihfB ihfB matP matP sxy-1 sxy-1 GCA_000283715_01097 GCA_000283715_01097 GCA_000283715_01111 GCA_000283715_01111 rpmF rpmF npdA npdA GCA_000283715_01259 GCA_000283715_01259 cutC cutC GCA_000283715_01317 GCA_000283715_01317 edd edd GCA_000283715_01456 GCA_000283715_01456 topB topB rpmI rpmI rplT rplT ihfA ihfA GCA_000283715_01621 GCA_000283715_01621 nth nth rnfC rnfC GCA_000283715_01740 GCA_000283715_01740 dnaC_2 dnaC_2 BZ172_25705 BZ172_25705 BZ172_25170 BZ172_25170 rpsV rpsV GCA_000283715_01883 GCA_000283715_01883 BZ172_25330 BZ172_25330 GCA_000283715_02009 GCA_000283715_02009 GCA_000283715_02168 GCA_000283715_02168 dpnA dpnA yedK yedK pduA_1 pduA_1 pduB pduB pduC pduC pduD pduD pduE pduE ddrA ddrA BZ172_00260 BZ172_00260 pduA_2 pduA_2 ccmK2 ccmK2 pduL pduL BZ172_00280 BZ172_00280 ccmL ccmL yvqK yvqK GCA_000283715_02358 GCA_000283715_02358 adhE_2 adhE_2 GCA_000283715_02360 GCA_000283715_02360 ccmK1 ccmK1 pduU pduU BZ172_00320 BZ172_00320 yegP yegP BZ172_00715 BZ172_00715 rplY rplY BZ172_01310 BZ172_01310 GCA_000283715_02762 GCA_000283715_02762 eutK eutK BZ172_03060 BZ172_03060 eutC eutC GCA_000283715_02853 GCA_000283715_02853 eutA eutA eutG eutG eutE eutE eutN eutN BZ172_03105 BZ172_03105 eutT eutT eutQ eutQ eutP eutP eutS eutS hda hda BZ172_03475 BZ172_03475 GCA_000283715_02960 GCA_000283715_02960 GCA_000283715_02961 GCA_000283715_02961 GCA_000283715_03000 GCA_000283715_03000 GCA_000283715_03012 GCA_000283715_03012 GCA_000283715_03055 GCA_000283715_03055 GCA_000283715_03074 GCA_000283715_03074 recO recO recN recN rpsP rpsP rplS rplS GCA_000283715_03160 GCA_000283715_03160 raiA raiA dnaB_2 dnaB_2 BZ172_05465 BZ172_05465 sicA sicA BZ172_06375 BZ172_06375 GCA_000283715_03557 GCA_000283715_03557 rpsU rpsU dnaG dnaG diaA diaA rpsO rpsO GCA_000283715_03745 GCA_000283715_03745 rpmA rpmA rplU rplU sspB sspB rpsI rpsI rplM rplM cafA cafA mreB mreB fis fis yhdJ yhdJ yrdD yrdD rplQ rplQ rpsD rpsD rpsK rpsK rpsM rpsM rpmJ rpmJ rplO rplO rpmD rpmD rpsE rpsE rplR rplR rplF rplF rpsH rpsH rpsN rpsN rplE rplE rplX rplX rplN rplN rpsQ rpsQ rpmC rpmC rplP rplP rpsC rpsC rpsS rpsS rplB rplB rplW rplW rplD rplD rplC rplC rpsJ rpsJ GCA_000283715_03896 GCA_000283715_03896 rpsG rpsG rpsL rpsL GCA_000283715_04014 GCA_000283715_04014 ybhF_1 ybhF_1 GCA_000283715_04080 GCA_000283715_04080 rpmH rpmH dnaA dnaA recF recF GCA_000283715_04195 GCA_000283715_04195 ttk ttk radC_1 radC_1 BZ172_10655 BZ172_10655 rpmB rpmB rpmG rpmG BZ172_10895 BZ172_10895 GCA_000283715_04331 GCA_000283715_04331 GCA_000283715_04332 GCA_000283715_04332 GCA_000283715_04399 GCA_000283715_04399 rep rep BZ172_12150 BZ172_12150 dtd dtd GCA_000283715_04571 GCA_000283715_04571 priA priA rpmE rpmE GCA_000283715_04633 GCA_000283715_04633 rplK rplK rplA rplA rplJ rplJ rplL rplL hupA hupA dnaB_1 dnaB_1 yjdA yjdA rpsF rpsF priB priB rpsR rpsR rplI rplI GCA_000283715_04996 GCA_000283715_04996 dnaC_1 dnaC_1 dnaT dnaT BZ172_29700 BZ172_29700 GCA_000283715_05159 GCA_000283715_05159 virB virB GCA_000283715_05253 GCA_000283715_05253 GCA_000283715_05265 GCA_000283715_05265 BZ172_30460 BZ172_30460 GCA_000283715_05291 GCA_000283715_05291
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rplVUnannotated protein; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (110 aa)
BZ172_02585Unannotated protein. (265 aa)
rpsTUnannotated protein; Binds directly to 16S ribosomal RNA. (87 aa)
BZ172_16630Unannotated protein. (270 aa)
rpsBUnannotated protein; Belongs to the universal ribosomal protein uS2 family. (241 aa)
BZ172_19440Unannotated protein. (251 aa)
BZ172_17430Unannotated protein. (201 aa)
hupBUnannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa)
priCUnannotated protein. (175 aa)
ybaBUnannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (109 aa)
recRUnannotated protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (201 aa)
aesUnannotated protein; Displays esterase activity towards short chain fatty esters (acyl chain length of up to 8 carbons). Able to hydrolyze triacetylglycerol (triacetin) and tributyrylglycerol (tributyrin), but not trioleylglycerol (triolein) or cholesterol oleate. Negatively regulates MalT activity by antagonizing maltotriose binding. Inhibits MelA galactosidase activity. (319 aa)
ybeSUnannotated protein. (475 aa)
GCA_000283715_00674Unannotated protein. (251 aa)
GCA_000283715_00723Unannotated protein. (265 aa)
GCA_000283715_00758Unannotated protein. (224 aa)
dnaC_3Unannotated protein. (248 aa)
ybiIUnannotated protein. (88 aa)
rarAUnannotated protein. (447 aa)
rpsAUnannotated protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (557 aa)
ihfBUnannotated protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (94 aa)
matPUnannotated protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain. (150 aa)
sxy-1Unannotated protein. (209 aa)
GCA_000283715_01097Unannotated protein. (265 aa)
GCA_000283715_01111Unannotated protein. (251 aa)
rpmFUnannotated protein; Belongs to the bacterial ribosomal protein bL32 family. (57 aa)
npdAUnannotated protein; Belongs to the sirtuin family. Class III subfamily. (273 aa)
GCA_000283715_01259Unannotated protein. (251 aa)
cutCUnannotated protein; Participates in the control of copper homeostasis. (248 aa)
GCA_000283715_01317Unannotated protein. (265 aa)
eddUnannotated protein; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (603 aa)
GCA_000283715_01456Unannotated protein. (265 aa)
topBUnannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (653 aa)
rpmIUnannotated protein; Belongs to the bacterial ribosomal protein bL35 family. (65 aa)
rplTUnannotated protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (118 aa)
ihfAUnannotated protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (99 aa)
GCA_000283715_01621Unannotated protein. (181 aa)
nthUnannotated protein; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (211 aa)
rnfCUnannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Required to maintain the reduced state of SoxR; Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (740 aa)
GCA_000283715_01740Unannotated protein. (260 aa)
dnaC_2Unannotated protein. (248 aa)
BZ172_25705Unannotated protein. (354 aa)
BZ172_25170Unannotated protein. (265 aa)
rpsVUnannotated protein. (45 aa)
GCA_000283715_01883Unannotated protein. (251 aa)
BZ172_25330Unannotated protein. (248 aa)
GCA_000283715_02009Unannotated protein. (399 aa)
GCA_000283715_02168Unannotated protein. (184 aa)
dpnAUnannotated protein; Belongs to the N(4)/N(6)-methyltransferase family. (352 aa)
yedKUnannotated protein; Belongs to the SOS response-associated peptidase family. (223 aa)
pduA_1Unannotated protein. (94 aa)
pduBUnannotated protein. (233 aa)
pduCUnannotated protein. (554 aa)
pduDUnannotated protein. (222 aa)
pduEUnannotated protein. (172 aa)
ddrAUnannotated protein. (610 aa)
BZ172_00260Unannotated protein. (116 aa)
pduA_2Unannotated protein. (91 aa)
ccmK2Unannotated protein. (140 aa)
pduLUnannotated protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (210 aa)
BZ172_00280Unannotated protein. (163 aa)
ccmLUnannotated protein. (91 aa)
yvqKUnannotated protein; Belongs to the Cob(I)alamin adenosyltransferase family. (335 aa)
GCA_000283715_02358Unannotated protein. (394 aa)
adhE_2Unannotated protein. (370 aa)
GCA_000283715_02360Unannotated protein. (447 aa)
ccmK1Unannotated protein. (184 aa)
pduUUnannotated protein. (116 aa)
BZ172_00320Unannotated protein; Belongs to the EutP/PduV family. (147 aa)
yegPUnannotated protein. (110 aa)
BZ172_00715Unannotated protein. (334 aa)
rplYUnannotated protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. (94 aa)
BZ172_01310Unannotated protein. (265 aa)
GCA_000283715_02762Unannotated protein. (265 aa)
eutKUnannotated protein. (166 aa)
BZ172_03060Unannotated protein. (219 aa)
eutCUnannotated protein; Belongs to the EutC family. (295 aa)
GCA_000283715_02853Unannotated protein. (453 aa)
eutAUnannotated protein. (467 aa)
eutGUnannotated protein. (395 aa)
eutEUnannotated protein. (467 aa)
eutNUnannotated protein. (95 aa)
BZ172_03105Unannotated protein. (111 aa)
eutTUnannotated protein. (267 aa)
eutQUnannotated protein. (233 aa)
eutPUnannotated protein; Belongs to the EutP/PduV family. (159 aa)
eutSUnannotated protein. (111 aa)
hdaUnannotated protein; Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA; Belongs to the DnaA family. HdA subfamily. (248 aa)
BZ172_03475Unannotated protein. (258 aa)
GCA_000283715_02960Unannotated protein. (899 aa)
GCA_000283715_02961Unannotated protein. (193 aa)
GCA_000283715_03000Unannotated protein. (139 aa)
GCA_000283715_03012Unannotated protein. (97 aa)
GCA_000283715_03055Unannotated protein. (251 aa)
GCA_000283715_03074Unannotated protein. (265 aa)
recOUnannotated protein; Involved in DNA repair and RecF pathway recombination. Belongs to the RecO family. (242 aa)
recNUnannotated protein; May be involved in recombinational repair of damaged DNA. (553 aa)
rpsPUnannotated protein; Belongs to the bacterial ribosomal protein bS16 family. (82 aa)
rplSUnannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (115 aa)
GCA_000283715_03160Unannotated protein. (265 aa)
raiAUnannotated protein. (113 aa)
dnaB_2Unannotated protein. (463 aa)
BZ172_05465Unannotated protein. (249 aa)
sicAUnannotated protein. (163 aa)
BZ172_06375Unannotated protein. (192 aa)
GCA_000283715_03557Unannotated protein. (227 aa)
rpsUUnannotated protein; Belongs to the bacterial ribosomal protein bS21 family. (71 aa)
dnaGUnannotated protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (581 aa)
diaAUnannotated protein; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily. (196 aa)
rpsOUnannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa)
GCA_000283715_03745Unannotated protein. (265 aa)
rpmAUnannotated protein; Belongs to the bacterial ribosomal protein bL27 family. (85 aa)
rplUUnannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa)
sspBUnannotated protein. (165 aa)
rpsIUnannotated protein; Belongs to the universal ribosomal protein uS9 family. (130 aa)
rplMUnannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa)
cafAUnannotated protein. (489 aa)
mreBUnannotated protein. (347 aa)
fisUnannotated protein; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family. (98 aa)
yhdJUnannotated protein; Belongs to the N(4)/N(6)-methyltransferase family. (294 aa)
yrdDUnannotated protein. (180 aa)
rplQUnannotated protein. (127 aa)
rpsDUnannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa)
rpsKUnannotated protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa)
rpsMUnannotated protein; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (118 aa)
rpmJUnannotated protein; Belongs to the bacterial ribosomal protein bL36 family. (38 aa)
rplOUnannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa)
rpmDUnannotated protein. (59 aa)
rpsEUnannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (167 aa)
rplRUnannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (117 aa)
rplFUnannotated protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa)
rpsHUnannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa)
rpsNUnannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
rplEUnannotated protein; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa)
rplXUnannotated protein; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (104 aa)
rplNUnannotated protein; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (123 aa)
rpsQUnannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (84 aa)
rpmCUnannotated protein; Belongs to the universal ribosomal protein uL29 family. (63 aa)
rplPUnannotated protein; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (136 aa)
rpsCUnannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (233 aa)
rpsSUnannotated protein; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
rplBUnannotated protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (273 aa)
rplWUnannotated protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (100 aa)
rplDUnannotated protein; Forms part of the polypeptide exit tunnel. (201 aa)
rplCUnannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (209 aa)
rpsJUnannotated protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa)
GCA_000283715_03896Unannotated protein. (265 aa)
rpsGUnannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rpsLUnannotated protein; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (124 aa)
GCA_000283715_04014Unannotated protein. (604 aa)
ybhF_1Unannotated protein. (911 aa)
GCA_000283715_04080Unannotated protein. (265 aa)
rpmHUnannotated protein; Belongs to the bacterial ribosomal protein bL34 family. (46 aa)
dnaAUnannotated protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (467 aa)
recFUnannotated protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (357 aa)
GCA_000283715_04195Unannotated protein. (265 aa)
ttkUnannotated protein; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions. (198 aa)
radC_1Unannotated protein. (65 aa)
BZ172_10655Unannotated protein; Belongs to the UPF0758 family. (165 aa)
rpmBUnannotated protein; Belongs to the bacterial ribosomal protein bL28 family. (78 aa)
rpmGUnannotated protein; Belongs to the bacterial ribosomal protein bL33 family. (55 aa)
BZ172_10895Unannotated protein. (224 aa)
GCA_000283715_04331Unannotated protein. (548 aa)
GCA_000283715_04332Unannotated protein. (582 aa)
GCA_000283715_04399Unannotated protein. (265 aa)
repUnannotated protein; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. (673 aa)
BZ172_12150Unannotated protein. (611 aa)
dtdUnannotated protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa)
GCA_000283715_04571Unannotated protein. (74 aa)
priAUnannotated protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (732 aa)
rpmEUnannotated protein; Binds the 23S rRNA. (70 aa)
GCA_000283715_04633Unannotated protein. (265 aa)
rplKUnannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (142 aa)
rplAUnannotated protein; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (234 aa)
rplJUnannotated protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (165 aa)
rplLUnannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (121 aa)
hupAUnannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa)
dnaB_1Unannotated protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (471 aa)
yjdAUnannotated protein. (742 aa)
rpsFUnannotated protein; Binds together with S18 to 16S ribosomal RNA. (131 aa)
priBUnannotated protein; Binds single-stranded DNA at the primosome assembly site (PAS). During primosome assembly it facilitates the complex formation between PriA and DnaT; Belongs to the PriB family. (104 aa)
rpsRUnannotated protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (75 aa)
rplIUnannotated protein; Binds to the 23S rRNA. (149 aa)
GCA_000283715_04996Unannotated protein. (265 aa)
dnaC_1Unannotated protein. (245 aa)
dnaTUnannotated protein; This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with DnaB protein and other prepriming proteins DnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N'. (179 aa)
BZ172_29700Unannotated protein; Belongs to the ParB family. (326 aa)
GCA_000283715_05159Unannotated protein. (265 aa)
virBUnannotated protein; Transcription activator for the invasion antigens IpaB, IpaC and IpaD. VirB is itself regulated by VirF. (309 aa)
GCA_000283715_05253Unannotated protein. (251 aa)
GCA_000283715_05265Unannotated protein. (265 aa)
BZ172_30460Unannotated protein. (77 aa)
GCA_000283715_05291Unannotated protein. (265 aa)
Your Current Organism:
Shigella sonnei
NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G
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