Genes that are sometimes fused into single open reading frames.
loading ...
currently showing
Experiments
Co-purification, co-crystallization, Yeast2Hybrid, Genetic Interactions, etc ... as imported from primary sources.
loading ...
currently showing
Coexpression
Proteins whose genes are observed to be correlated in expression, across a large number of experiments.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lacZ
Unannotated protein; Belongs to the glycosyl hydrolase 2 family. (1024 aa)
uidA
Unannotated protein; Belongs to the glycosyl hydrolase 2 family. (603 aa)
ebgA
Unannotated protein. (941 aa)
Your Current Organism:
Shigella sonnei
NCBI taxonomy Id: 216599 Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G