STRINGSTRING
mrdA mrdA ftsI ftsI mrcB mrcB yaiH yaiH glsA_1 glsA_1 BZ172_19070 BZ172_19070 glsA_2 glsA_2 dacD dacD BZ172_00975 BZ172_00975 BZ172_01540 BZ172_01540 estB estB pbpC pbpC dacB dacB mrcA mrcA ampC ampC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mrdAUnannotated protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. (633 aa)
ftsIUnannotated protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. (588 aa)
mrcBUnannotated protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). (844 aa)
yaiHUnannotated protein. (385 aa)
glsA_1Unannotated protein; Belongs to the glutaminase family. (310 aa)
BZ172_19070Unannotated protein; Belongs to the peptidase S11 family. (427 aa)
glsA_2Unannotated protein; Belongs to the glutaminase family. (308 aa)
dacDUnannotated protein; Belongs to the peptidase S11 family. (388 aa)
BZ172_00975Unannotated protein; Belongs to the peptidase S11 family. (310 aa)
BZ172_01540Unannotated protein. (549 aa)
estBUnannotated protein; Belongs to the peptidase S12 family. YfeW subfamily. (434 aa)
pbpCUnannotated protein. (770 aa)
dacBUnannotated protein. (477 aa)
mrcAUnannotated protein. (850 aa)
ampCUnannotated protein. (377 aa)
Your Current Organism:
Shigella sonnei
NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G
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