STRINGSTRING
zraS zraS phoR phoR htpG htpG BZ172_18660 BZ172_18660 dpiB dpiB kdpD kdpD BZ172_21590 BZ172_21590 phoQ phoQ cheA cheA rstB rstB narX narX yedV yedV baeS baeS yehU yehU yojN yojN rcsC rcsC atoS atoS evgS evgS BZ172_02770 BZ172_02770 BZ172_03165 BZ172_03165 BZ172_03665 BZ172_03665 barA barA qseC qseC parE parE arcB arcB envZ envZ gyrB gyrB uhpB uhpB glnL glnL cpxA cpxA BZ172_13945 BZ172_13945 yjdH yjdH mutL mutL creC creC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
zraSUnannotated protein. (458 aa)
phoRUnannotated protein. (431 aa)
htpGUnannotated protein; Molecular chaperone. Has ATPase activity. (624 aa)
BZ172_18660Unannotated protein; Member of a two-component regulatory system. (482 aa)
dpiBUnannotated protein. (552 aa)
kdpDUnannotated protein. (894 aa)
BZ172_21590Unannotated protein. (899 aa)
phoQUnannotated protein. (486 aa)
cheAUnannotated protein. (654 aa)
rstBUnannotated protein. (433 aa)
narXUnannotated protein. (598 aa)
yedVUnannotated protein; Member of a two-component regulatory system. (452 aa)
baeSUnannotated protein. (467 aa)
yehUUnannotated protein. (561 aa)
yojNUnannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB. (890 aa)
rcsCUnannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (949 aa)
atoSUnannotated protein. (597 aa)
evgSUnannotated protein. (1197 aa)
BZ172_02770Unannotated protein. (565 aa)
BZ172_03165Unannotated protein. (566 aa)
BZ172_03665Unannotated protein. (460 aa)
barAUnannotated protein. (918 aa)
qseCUnannotated protein. (449 aa)
parEUnannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (630 aa)
arcBUnannotated protein. (778 aa)
envZUnannotated protein. (450 aa)
gyrBUnannotated protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (804 aa)
uhpBUnannotated protein. (500 aa)
glnLUnannotated protein. (349 aa)
cpxAUnannotated protein. (457 aa)
BZ172_13945Unannotated protein. (366 aa)
yjdHUnannotated protein. (543 aa)
mutLUnannotated protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (615 aa)
creCUnannotated protein. (474 aa)
Your Current Organism:
Shigella sonnei
NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G
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