STRINGSTRING
BZ172_27835 BZ172_27835 lacZ lacZ GCA_000283715_00704 GCA_000283715_00704 BZ172_21070 BZ172_21070 GCA_000283715_00961 GCA_000283715_00961 BZ172_23465 BZ172_23465 GCA_000283715_01342 GCA_000283715_01342 GCA_000283715_01343 GCA_000283715_01343 GCA_000283715_01586 GCA_000283715_01586 GCA_000283715_04596 GCA_000283715_04596 ebgC ebgC ebgA ebgA yjgK_3 yjgK_3 yjgK_2 yjgK_2 yjgK_1 yjgK_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BZ172_27835Unannotated protein. (918 aa)
lacZUnannotated protein; Belongs to the glycosyl hydrolase 2 family. (1024 aa)
GCA_000283715_00704Unannotated protein. (877 aa)
BZ172_21070Unannotated protein. (470 aa)
GCA_000283715_00961Unannotated protein. (252 aa)
BZ172_23465Unannotated protein. (416 aa)
GCA_000283715_01342Unannotated protein. (102 aa)
GCA_000283715_01343Unannotated protein. (461 aa)
GCA_000283715_01586Unannotated protein. (678 aa)
GCA_000283715_04596Unannotated protein. (772 aa)
ebgCUnannotated protein. (149 aa)
ebgAUnannotated protein. (941 aa)
yjgK_3Unannotated protein. (99 aa)
yjgK_2Unannotated protein. (47 aa)
yjgK_1Unannotated protein. (154 aa)
Your Current Organism:
Shigella sonnei
NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G
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