STRINGSTRING
pgi pgi BZ172_14375 BZ172_14375 mak mak maa maa ahpC ahpC nagC nagC BZ172_30070 BZ172_30070 nagA nagA nagB nagB BZ172_30065 BZ172_30065 nagE nagE pgm pgm galK galK galT galT galE galE BZ172_21070 BZ172_21070 GCA_000283715_00961 GCA_000283715_00961 ptsG ptsG nagZ nagZ ycfX ycfX manZ manZ manY_2 manY_2 manX_3 manX_3 malX malX manA manA mic mic galU galU yedZ yedZ ugd ugd cpsG cpsG cpsB cpsB fcl fcl gmd gmd lacA lacA arnB arnB arnC arnC arnA arnA arnD arnD BZ172_02635 BZ172_02635 GCA_000283715_02772 GCA_000283715_02772 glk glk crr crr murQ murQ BZ172_03005 BZ172_03005 GCA_000283715_02962 GCA_000283715_02962 GCA_000283715_02963 GCA_000283715_02963 xerD_2 xerD_2 glmM glmM murA murA yhbJ yhbJ yhcI yhcI nanE nanE nanA nanA yrdD yrdD GCA_000283715_03900 GCA_000283715_03900 frlB frlB glgC glgC yhhM yhhM BZ172_09310 BZ172_09310 BZ172_09285 BZ172_09285 glmS glmS glmU_1 glmU_1 GCA_000283715_05034 GCA_000283715_05034 wbgZ wbgZ wecB wecB wecC wecC murB murB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pgiUnannotated protein; Belongs to the GPI family. (549 aa)
BZ172_14375Unannotated protein. (153 aa)
makUnannotated protein. (302 aa)
maaUnannotated protein. (183 aa)
ahpCUnannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa)
nagCUnannotated protein. (406 aa)
BZ172_30070Unannotated protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (437 aa)
nagAUnannotated protein. (382 aa)
nagBUnannotated protein; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. (266 aa)
BZ172_30065Unannotated protein. (341 aa)
nagEUnannotated protein. (648 aa)
pgmUnannotated protein. (546 aa)
galKUnannotated protein; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (382 aa)
galTUnannotated protein; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family. (348 aa)
galEUnannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (338 aa)
BZ172_21070Unannotated protein. (470 aa)
GCA_000283715_00961Unannotated protein. (252 aa)
ptsGUnannotated protein. (477 aa)
nagZUnannotated protein; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (341 aa)
ycfXUnannotated protein; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P. (303 aa)
manZUnannotated protein. (283 aa)
manY_2Unannotated protein. (266 aa)
manX_3Unannotated protein. (323 aa)
malXUnannotated protein. (530 aa)
manAUnannotated protein; Belongs to the mannose-6-phosphate isomerase type 1 family. (391 aa)
micUnannotated protein. (406 aa)
galUUnannotated protein. (302 aa)
yedZUnannotated protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation, including the primary periplasmic chaperone SurA and the lipoprotein Pal. MsrQ provides e [...] (211 aa)
ugdUnannotated protein. (388 aa)
cpsGUnannotated protein. (456 aa)
cpsBUnannotated protein; Belongs to the mannose-6-phosphate isomerase type 2 family. (478 aa)
fclUnannotated protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (321 aa)
gmdUnannotated protein; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (373 aa)
lacAUnannotated protein. (182 aa)
arnBUnannotated protein; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily. (385 aa)
arnCUnannotated protein; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. (322 aa)
arnAUnannotated protein; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily. (660 aa)
arnDUnannotated protein; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily. (296 aa)
BZ172_02635Unannotated protein. (74 aa)
GCA_000283715_02772Unannotated protein. (162 aa)
glkUnannotated protein; Belongs to the bacterial glucokinase family. (321 aa)
crrUnannotated protein. (169 aa)
murQUnannotated protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily. (298 aa)
BZ172_03005Unannotated protein. (412 aa)
GCA_000283715_02962Unannotated protein. (298 aa)
GCA_000283715_02963Unannotated protein. (80 aa)
xerD_2Unannotated protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerC binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerD specifically exchanges the bot [...] (298 aa)
glmMUnannotated protein; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (445 aa)
murAUnannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (419 aa)
yhbJUnannotated protein; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily. (284 aa)
yhcIUnannotated protein; Catalyzes the phosphorylation of N-acetylmannosamine (ManNAc) to ManNAc-6-P; Belongs to the ROK (NagC/XylR) family. NanK subfamily. (291 aa)
nanEUnannotated protein; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). (229 aa)
nanAUnannotated protein; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. (297 aa)
yrdDUnannotated protein. (180 aa)
GCA_000283715_03900Unannotated protein. (192 aa)
frlBUnannotated protein. (340 aa)
glgCUnannotated protein; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. (431 aa)
yhhMUnannotated protein. (119 aa)
BZ172_09310Unannotated protein. (129 aa)
BZ172_09285Unannotated protein. (94 aa)
glmSUnannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (609 aa)
glmU_1Unannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (456 aa)
GCA_000283715_05034Unannotated protein. (189 aa)
wbgZUnannotated protein. (639 aa)
wecBUnannotated protein; Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP- N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues. (376 aa)
wecCUnannotated protein; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily. (420 aa)
murBUnannotated protein; Cell wall formation. (342 aa)
Your Current Organism:
Shigella sonnei
NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G
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