STRINGSTRING
yfeX yfeX caiD caiD ilvI ilvI ilvH ilvH mhpF mhpF sdhC sdhC sdhD sdhD sdhA sdhA sdhB sdhB csdB csdB GCA_000283715_00946 GCA_000283715_00946 efeB efeB BZ172_23955 BZ172_23955 atoD_2 atoD_2 sad sad gadB_1 gadB_1 ydbK ydbK GCA_000283715_02092 GCA_000283715_02092 GCA_000283715_02093 GCA_000283715_02093 adhE_3 adhE_3 atoA atoA thlA_1 thlA_1 fadJ fadJ ucpA ucpA gabT gabT thlA_2 thlA_2 pflB1 pflB1 gadB_2 gadB_2 ilvB ilvB ilvN ilvN ilvG ilvG ilvM ilvM fadB fadB yihU yihU GCA_000283715_04652 GCA_000283715_04652 GCA_000283715_04653 GCA_000283715_04653 frdD frdD frdC frdC frdB frdB BZ172_14295 BZ172_14295 grcA grcA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yfeXUnannotated protein. (299 aa)
caiDUnannotated protein; Catalyzes the reversible dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA. (261 aa)
ilvIUnannotated protein. (574 aa)
ilvHUnannotated protein. (163 aa)
mhpFUnannotated protein; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. (316 aa)
sdhCUnannotated protein. (134 aa)
sdhDUnannotated protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (115 aa)
sdhAUnannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (588 aa)
sdhBUnannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (238 aa)
csdBUnannotated protein. (810 aa)
GCA_000283715_00946Unannotated protein. (760 aa)
efeBUnannotated protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (423 aa)
BZ172_23955Unannotated protein. (361 aa)
atoD_2Unannotated protein. (194 aa)
sadUnannotated protein. (462 aa)
gadB_1Unannotated protein; Belongs to the group II decarboxylase family. (466 aa)
ydbKUnannotated protein. (1174 aa)
GCA_000283715_02092Unannotated protein. (233 aa)
GCA_000283715_02093Unannotated protein. (179 aa)
adhE_3Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (891 aa)
atoAUnannotated protein. (216 aa)
thlA_1Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
fadJUnannotated protein; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (714 aa)
ucpAUnannotated protein. (263 aa)
gabTUnannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (426 aa)
thlA_2Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
pflB1Unannotated protein. (764 aa)
gadB_2Unannotated protein; Belongs to the group II decarboxylase family. (466 aa)
ilvBUnannotated protein. (562 aa)
ilvNUnannotated protein. (96 aa)
ilvGUnannotated protein. (548 aa)
ilvMUnannotated protein. (87 aa)
fadBUnannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (729 aa)
yihUUnannotated protein; Reduces 3-sulfolactaldehyde (SLA) to 2,3-dihydroxypropane 1- sulfonate (DHPS); Belongs to the HIBADH-related family. 3-sulfolactaldehyde reductase subfamily. (292 aa)
GCA_000283715_04652Unannotated protein. (661 aa)
GCA_000283715_04653Unannotated protein. (116 aa)
frdDUnannotated protein; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (119 aa)
frdCUnannotated protein; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (131 aa)
frdBUnannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (244 aa)
BZ172_14295Unannotated protein. (602 aa)
grcAUnannotated protein; Acts as a radical domain for damaged PFL and possibly other radical proteins. (127 aa)
Your Current Organism:
Shigella sonnei
NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G
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