Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APH39368.1 | APH39371.1 | BHR79_07675 | BHR79_07690 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.588 |
| APH39368.1 | cdhA | BHR79_07675 | BHR79_07705 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | 0.472 |
| APH39368.1 | cdhB | BHR79_07675 | BHR79_07700 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. The precise role of the epsilon subunit is unclear; it may have a stabilizing role within the alpha(2)epsilon(2) component and/or be involved in electron transfer to FAD during a potential FAD- mediated CO oxidation. | 0.461 |
| APH39368.1 | cdhC | BHR79_07675 | BHR79_07695 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon complex generates CO from CO(2), while the beta subunit (this protein) combines the CO with CoA and a methyl group to form acetyl-CoA. The methyl group, which is incorporated into acetyl-CoA, is transferred to the beta subunit by a corrinoid iron- sulfur protein (the gamma-delta complex). | 0.593 |
| APH39368.1 | cdhD | BHR79_07675 | BHR79_07685 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | CO dehydrogenase/acetyl-CoA synthase subunit delta; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. Probably maintains the overall quaternary structure of the ACDS complex. | 0.640 |
| APH39368.1 | cdhE | BHR79_07675 | BHR79_07680 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA synthase subunit gamma; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. | 0.645 |
| APH39371.1 | APH39368.1 | BHR79_07690 | BHR79_07675 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.588 |
| APH39371.1 | APH39375.1 | BHR79_07690 | BHR79_07710 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
| APH39371.1 | APH39376.1 | BHR79_07690 | BHR79_07715 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
| APH39371.1 | cdhA | BHR79_07690 | BHR79_07705 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | 0.927 |
| APH39371.1 | cdhB | BHR79_07690 | BHR79_07700 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. The precise role of the epsilon subunit is unclear; it may have a stabilizing role within the alpha(2)epsilon(2) component and/or be involved in electron transfer to FAD during a potential FAD- mediated CO oxidation. | 0.945 |
| APH39371.1 | cdhC | BHR79_07690 | BHR79_07695 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon complex generates CO from CO(2), while the beta subunit (this protein) combines the CO with CoA and a methyl group to form acetyl-CoA. The methyl group, which is incorporated into acetyl-CoA, is transferred to the beta subunit by a corrinoid iron- sulfur protein (the gamma-delta complex). | 0.987 |
| APH39371.1 | cdhD | BHR79_07690 | BHR79_07685 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | CO dehydrogenase/acetyl-CoA synthase subunit delta; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. Probably maintains the overall quaternary structure of the ACDS complex. | 0.989 |
| APH39371.1 | cdhE | BHR79_07690 | BHR79_07680 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA synthase subunit gamma; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. | 0.983 |
| APH39375.1 | APH39371.1 | BHR79_07710 | BHR79_07690 | Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
| APH39375.1 | APH39376.1 | BHR79_07710 | BHR79_07715 | Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.854 |
| APH39375.1 | APH39377.1 | BHR79_07710 | BHR79_07720 | Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | TIGR00288 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.690 |
| APH39375.1 | cdhA | BHR79_07710 | BHR79_07705 | Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | 0.469 |
| APH39375.1 | cdhB | BHR79_07710 | BHR79_07700 | Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. The precise role of the epsilon subunit is unclear; it may have a stabilizing role within the alpha(2)epsilon(2) component and/or be involved in electron transfer to FAD during a potential FAD- mediated CO oxidation. | 0.634 |
| APH39375.1 | cdhC | BHR79_07710 | BHR79_07695 | Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon complex generates CO from CO(2), while the beta subunit (this protein) combines the CO with CoA and a methyl group to form acetyl-CoA. The methyl group, which is incorporated into acetyl-CoA, is transferred to the beta subunit by a corrinoid iron- sulfur protein (the gamma-delta complex). | 0.574 |
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