STRINGSTRING
BPSY_0656 BPSY_0656 BPSY_0657 BPSY_0657 metAA metAA BPSY_0973 BPSY_0973 BPSY_0990 BPSY_0990 BPSY_1207 BPSY_1207 BPSY_1208 BPSY_1208 luxS luxS BPSY_1353 BPSY_1353 BPSY_1629 BPSY_1629 metE metE BPSY_1751 BPSY_1751 BPSY_1762 BPSY_1762 BPSY_1772 BPSY_1772 BPSY_2041 BPSY_2041 BPSY_2048 BPSY_2048 BPSY_2084 BPSY_2084
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BPSY_0656O-acetylhomoserine aminocarboxypropyltransferase. (439 aa)
BPSY_0657CoA-binding domain-containing protein. (193 aa)
metAAHomoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. (352 aa)
BPSY_0973MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. (243 aa)
BPSY_0990Cystathionine gamma lyase. (408 aa)
BPSY_1207Cystathionine beta-synthase. (337 aa)
BPSY_1208Cystathionine gamma-synthase. (391 aa)
luxSLuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. (162 aa)
BPSY_1353Methyltransferase. (289 aa)
BPSY_16295,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (236 aa)
metE5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (770 aa)
BPSY_1751Aminotransferase. (419 aa)
BPSY_1762O-acetylhomoserine (thiol)-lyase. (436 aa)
BPSY_1772Aspartate aminotransferase. (392 aa)
BPSY_2041Cystathionine beta-lyase. (395 aa)
BPSY_2048Putative O-acetylhomoserine aminocarboxypropyltransferase. (435 aa)
BPSY_2084Putative O-acetylhomoserine aminocarboxypropyltransferase. (436 aa)
Your Current Organism:
Bifidobacterium psychraerophilum
NCBI taxonomy Id: 218140
Other names: B. psychraerophilum, Bifidobacterium psychraerophilum Simpson et al. 2004, JCM 15958, LMG 21775, LMG:21775, NCIMB 13940, strain T16
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