STRINGSTRING
BPSY_1751 BPSY_1751 BPSY_2041 BPSY_2041 BPSY_0062 BPSY_0062 metG metG BPSY_0542 BPSY_0542 BPSY_0607 BPSY_0607 BPSY_0904 BPSY_0904 BPSY_0990 BPSY_0990 BPSY_1208 BPSY_1208 BPSY_1556 BPSY_1556 metE metE BPSY_1664 BPSY_1664 BPSY_1772 BPSY_1772
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BPSY_1751Aminotransferase. (419 aa)
BPSY_2041Cystathionine beta-lyase. (395 aa)
BPSY_0062Thioredoxin; Belongs to the thioredoxin family. (113 aa)
metGmethionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (623 aa)
BPSY_0542Thioredoxin reductase. (322 aa)
BPSY_0607Thioredoxin reductase. (598 aa)
BPSY_0904Thioredoxin domain protein. (324 aa)
BPSY_0990Cystathionine gamma lyase. (408 aa)
BPSY_1208Cystathionine gamma-synthase. (391 aa)
BPSY_1556Methionine synthase II. (455 aa)
metE5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (770 aa)
BPSY_1664Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (427 aa)
BPSY_1772Aspartate aminotransferase. (392 aa)
Your Current Organism:
Bifidobacterium psychraerophilum
NCBI taxonomy Id: 218140
Other names: B. psychraerophilum, Bifidobacterium psychraerophilum Simpson et al. 2004, JCM 15958, LMG 21775, LMG:21775, NCIMB 13940, strain T16
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