STRINGSTRING
SUB0010 SUB0010 SUB0017 SUB0017 SUB0018 SUB0018 SUB0019 SUB0019 SUB0048 SUB0048 pbp1B pbp1B SUB0144 SUB0144 SUB0150 SUB0150 galE galE SUB0279 SUB0279 SUB0282 SUB0282 SUB0283 SUB0283 rpoE rpoE SUB0335 SUB0335 SUB0338 SUB0338 mecA mecA rgpG rgpG SUB0342 SUB0342 sufC sufC sufD sufD csdB csdB iscU iscU sufB sufB SUB0350 SUB0350 SUB0351 SUB0351 SUB0377 SUB0377 murC murC SUB0399 SUB0399 murE murE SUB0426 SUB0426 gcaD gcaD SUB0547 SUB0547 SUB0576 SUB0576 SUB0598 SUB0598 ftsW ftsW murN murN murM murM SUB0608 SUB0608 SUB0609 SUB0609 SUB0610 SUB0610 ftsE ftsE ftsX ftsX SUB0647 SUB0647 ezrA ezrA murA1 murA1 SUB0684 SUB0684 addB addB addA addA SUB0687 SUB0687 SUB0693 SUB0693 SUB0708 SUB0708 SUB0709 SUB0709 SUB0714 SUB0714 SUB0718 SUB0718 gor gor murB murB SUB0848 SUB0848 SUB0973 SUB0973 SUB1007 SUB1007 mnaA mnaA glmM glmM SUB1091 SUB1091 dacA dacA SUB1093 SUB1093 SUB1094 SUB1094 dltD dltD dltC dltC dltB dltB dltA dltA SUB1150 SUB1150 SUB1155 SUB1155 murZ murZ SUB1212 SUB1212 prsA1-2 prsA1-2 SUB1241 SUB1241 SUB1252 SUB1252 prfC prfC SUB1254 SUB1254 murF murF SUB1256 SUB1256 ddlA ddlA SUB1285 SUB1285 SUB1286 SUB1286 SUB1287 SUB1287 sepF sepF SUB1289 SUB1289 ftsZ ftsZ ftsA ftsA divIB divIB murG murG murD murD SUB1295 SUB1295 SUB1296 SUB1296 SUB1297 SUB1297 SUB1299 SUB1299 gpsB gpsB SUB1405 SUB1405 recU recU pbp1A pbp1A mraY mraY pbpX pbpX SUB1438 SUB1438 SUB1508 SUB1508 SUB1533 SUB1533 recG recG alr alr acpS acpS SUB1553 SUB1553 SUB1619 SUB1619 SUB1635 SUB1635 pbp2A pbp2A SUB1737 SUB1737 SUB1738 SUB1738
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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SUB0010Putative septum formation initiator protein. (123 aa)
SUB0017Rod shape-determining protein MreC. (272 aa)
SUB0018Putative membrane protein. (166 aa)
SUB0019Putative amidase. (425 aa)
SUB0048Putative amidase. (362 aa)
pbp1BPutative penicillin-binding protein 1B. (772 aa)
SUB0144Putative Mga-like regulatory protein. (499 aa)
SUB0150Conserved hypothetical protein. (416 aa)
galEUDP-glucose 4-epimerase (pseudogene); HMMPfam hit to PF01370, NAD dependent epimerase/dehydratase family, score 9e-139. (118 aa)
SUB0279Type I restriction-modification system M protein. (516 aa)
SUB0282Type I restriction-modification system S protein (pseudogene); Subunit R is required for both nuclease and ATPase activities, but not for modification. (1031 aa)
SUB0283Conserved hypothetical protein. (55 aa)
rpoEPutative DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. (188 aa)
SUB0335Conserved hypothetical protein. (38 aa)
SUB0338Putative membrane protein. (633 aa)
mecAAdapter protein MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. (252 aa)
rgpGPutative glycosyl transferase. (385 aa)
SUB0342Putative exported protein. (118 aa)
sufCPutative ABC transporter, ATP-binding protein. (256 aa)
sufDConserved hypothetical protein; In S. thermophilus sufD mutant displayed increased sensitivity to superoxide radicals compared to the wild type. SufD is likely to play a major role in oxidative stress defense, possibly resulting from its role in [Fe-S] cluster assembly and/or repair. (423 aa)
csdBPutative cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (408 aa)
iscUNifU-like protein; In S. thermophilus iscU mutant displayed increased sensitivity to superoxide radicals compared to the wild type. IscU is likely to play a major role in oxidative stress defense, possibly resulting from its role in [Fe-S] cluster assembly and/or repair. (149 aa)
sufBConserved hypothetical protein. (472 aa)
SUB0350Putative D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (400 aa)
SUB0351Putative D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (416 aa)
SUB0377Conserved hypothetical protein. (177 aa)
murCUDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (444 aa)
SUB0399Putative exported protein. (79 aa)
murEUDP-N-acetylmuramoylalanyl-D-glutamate--2,6-dia minopimelate ligase; Catalyzes the addition of L-lysine to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan; Belongs to the MurCDEF family. MurE subfamily. (482 aa)
SUB0426Putative polysaccharide biosynthesis protein. (545 aa)
gcaDBifunctional GlmU protein [includes: UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferas [...] (458 aa)
SUB0547Conserved hypothetical protein. (335 aa)
SUB0576Putative membrane protein. (91 aa)
SUB0598Glycosyl hydrolases family protein. (280 aa)
ftsWPutative cell division protein; Belongs to the SEDS family. (424 aa)
murNPutative peptidoglycan branched peptide synthesis protein. (410 aa)
murMPutative peptidoglycan pentaglycine interpeptide biosynthesis protein. (407 aa)
SUB0608Haloacid dehalogenase-like hydrolase. (269 aa)
SUB0609Putative phosphohydrolase. (433 aa)
SUB0610Conserved hypothetical protein. (132 aa)
ftsEPutative cell division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division. (230 aa)
ftsXPutative cell division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (309 aa)
SUB0647Putative peptidoglycan biosynthesis protein; Belongs to the SEDS family. (404 aa)
ezrASeptation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. (574 aa)
murA1UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (423 aa)
SUB0684Putative neutral zinc metallopeptidase. (304 aa)
addBPutative ATP-dependent exonuclease subunit B; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' -> 3' nuclease activity; Belongs to the helicase family. AddB/RexB type 2 subfamily. (1086 aa)
addAPutative ATP-dependent exonuclease subunit A; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily. (1220 aa)
SUB0687Putative aminotransferase. (376 aa)
SUB0693Conserved hypothetical protein. (112 aa)
SUB0708Putative ferredoxin. (65 aa)
SUB0709Putative membrane protein. (169 aa)
SUB0714Putative sulfatase. (732 aa)
SUB0718Conserved hypothetical protein; Belongs to the UPF0342 family. (112 aa)
gorGlutathione reductase. (449 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (303 aa)
SUB0848Conserved hypothetical protein. (116 aa)
SUB0973Conserved hypothetical protein. (198 aa)
SUB1007Putative lipoprotein. (207 aa)
mnaAUDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (365 aa)
glmMConserved hypothetical protein (pseudogene); Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (450 aa)
SUB1091Putative exported protein. (318 aa)
dacAPutative membrane protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (281 aa)
SUB1093Mur ligase family protein. (447 aa)
SUB1094Conserved hypothetical protein. (262 aa)
dltDPutative D-alanyl-lipoteichoic acid biosynthesis protein. (421 aa)
dltCD-alanyl carrier protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. (79 aa)
dltBPutative activated D-alanine transport protein; Could be involved in the transport of activated D-alanine through the membrane. (420 aa)
dltAD-alanine--poly(phosphoribitol) ligase subunit 1; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to [...] (512 aa)
SUB1150Putative membrane protein. (44 aa)
SUB1155Nicotinamide mononucleotide transporter. (232 aa)
murZPutative sugar transporter (pseudogene); Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (419 aa)
SUB1212Putative lipoprotein. (727 aa)
prsA1-2Foldase protein PrsA 1 precursor; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins. (314 aa)
SUB1241Putative lipoprotein. (350 aa)
SUB1252Hypothetical protein; Possible pseudogene, N-terminus contains hydrophobic residues that are part of possible N-terminal signal sequence. Extention of the CDS by 7 residues, and frameshift at a poly A hexamer generates possible alternative tranlational start site. (230 aa)
prfCPeptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. (514 aa)
SUB1254Putative membrane protein. (231 aa)
murFPutative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (456 aa)
SUB1256Putative membrane protein. (185 aa)
ddlAD-alanine--D-alanine ligase; Cell wall formation. (348 aa)
SUB1285Putative cell-division protein DivIVA. (254 aa)
SUB1286Conserved hypothetical protein. (263 aa)
SUB1287Putative membrane protein. (85 aa)
sepFConserved hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. (211 aa)
SUB1289Conserved hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (223 aa)
ftsZCell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (441 aa)
ftsAPutative cell division protein; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. (454 aa)
divIBPutative cell division protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily. (393 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (358 aa)
murDUDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (453 aa)
SUB1295Putative membrane protein. (79 aa)
SUB1296BipA family GTPase. (613 aa)
SUB1297Putative membrane protein. (126 aa)
SUB1299Conserved hypothetical protein. (72 aa)
gpsBDivIVA protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. (107 aa)
SUB1405Conserved hypothetical protein; Belongs to the UPF0398 family. (175 aa)
recUPutative recombination protein U homologue; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. (202 aa)
pbp1APutative penicillin-binding protein 1A. (739 aa)
mraYphospho-N-acetylmuramoyl-pentapeptide-transfera se; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (335 aa)
pbpXPutative penicillin binding protein 2x. (750 aa)
SUB1438Isoprenylcysteine carboxyl methyltransferase (ICMT) family protein. (179 aa)
SUB1508Putative D-alanyl-D-alanine carboxypeptidase. (248 aa)
SUB1533Aldo/keto reductase family protein. (305 aa)
recGATP-dependent DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (671 aa)
alrAlanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (368 aa)
acpSHolo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (118 aa)
SUB1553Putative membrane protein. (221 aa)
SUB1619Conserved hypothetical protein; Belongs to the UPF0356 family. (76 aa)
SUB1635Putative membrane anchored protein. (878 aa)
pbp2APenicillin-binding protein 2a. (774 aa)
SUB1737Putative exported protein. (545 aa)
SUB1738Putative dipeptidase. (498 aa)
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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