15 items (Streptococcus uberis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SUB0110	MarR-family regulatory protein. (147 aa)
	SUB0111	ABC transporter ATP-binding protein. (233 aa)
	SUB0112	ABC transporter permease protein. (271 aa)
	scaR	Metal-dependent transcriptional regulator. (215 aa)
	mtuA	Previously sequenced as Streptococcus uberis extracellular manganese-binding protein MtuA UniProt:Q70UQ6 (EMBL:SUB539135) (310 aa) fasta scores: E()=1.1e-111, 100.000% id in 310 aa; Belongs to the bacterial solute-binding protein 9 family. (310 aa)
	mtsB	Metal cation ABC transporter ATP-binding protein. (240 aa)
	mtsC	Metal cation ABC transporter membrane protein. (279 aa)
	adcA	Zinc-binding protein AdcA precursor; Belongs to the bacterial solute-binding protein 9 family. (518 aa)
	lmb	Laminin binding protein; Belongs to the bacterial solute-binding protein 9 family. (309 aa)
	SUB0978	GntR family regulatory protein. (214 aa)
	SUB1714	Ferric uptake regulator family protein; Belongs to the Fur family. (156 aa)
	SUB1715	Putative CoA binding protein. (144 aa)
	SUB1717	Putative glycine-betaine binding permease protein. (575 aa)
	SUB1718	Putative glycine betaine transport ATP-binding protein. (425 aa)
	SUB1719	Conserved hypothetical protein. (294 aa)

Your Current Organism:

Streptococcus uberis

NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SUB0110	SUB0111	SUB0110	SUB0111	MarR-family regulatory protein.	ABC transporter ATP-binding protein.	0.959
SUB0110	SUB0112	SUB0110	SUB0112	MarR-family regulatory protein.	ABC transporter permease protein.	0.961
SUB0110	adcA	SUB0110	SUB0634	MarR-family regulatory protein.	Zinc-binding protein AdcA precursor; Belongs to the bacterial solute-binding protein 9 family.	0.843
SUB0110	lmb	SUB0110	SUB0884	MarR-family regulatory protein.	Laminin binding protein; Belongs to the bacterial solute-binding protein 9 family.	0.702
SUB0111	SUB0110	SUB0111	SUB0110	ABC transporter ATP-binding protein.	MarR-family regulatory protein.	0.959
SUB0111	SUB0112	SUB0111	SUB0112	ABC transporter ATP-binding protein.	ABC transporter permease protein.	0.998
SUB0111	SUB1714	SUB0111	SUB1714	ABC transporter ATP-binding protein.	Ferric uptake regulator family protein; Belongs to the Fur family.	0.419
SUB0111	adcA	SUB0111	SUB0634	ABC transporter ATP-binding protein.	Zinc-binding protein AdcA precursor; Belongs to the bacterial solute-binding protein 9 family.	0.996
SUB0111	lmb	SUB0111	SUB0884	ABC transporter ATP-binding protein.	Laminin binding protein; Belongs to the bacterial solute-binding protein 9 family.	0.989
SUB0111	mtsC	SUB0111	SUB0475	ABC transporter ATP-binding protein.	Metal cation ABC transporter membrane protein.	0.903
SUB0111	mtuA	SUB0111	SUB0473	ABC transporter ATP-binding protein.	Previously sequenced as Streptococcus uberis extracellular manganese-binding protein MtuA UniProt:Q70UQ6 (EMBL:SUB539135) (310 aa) fasta scores: E()=1.1e-111, 100.000% id in 310 aa; Belongs to the bacterial solute-binding protein 9 family.	0.814
SUB0112	SUB0110	SUB0112	SUB0110	ABC transporter permease protein.	MarR-family regulatory protein.	0.961
SUB0112	SUB0111	SUB0112	SUB0111	ABC transporter permease protein.	ABC transporter ATP-binding protein.	0.998
SUB0112	adcA	SUB0112	SUB0634	ABC transporter permease protein.	Zinc-binding protein AdcA precursor; Belongs to the bacterial solute-binding protein 9 family.	0.997
SUB0112	lmb	SUB0112	SUB0884	ABC transporter permease protein.	Laminin binding protein; Belongs to the bacterial solute-binding protein 9 family.	0.981
SUB0112	mtsB	SUB0112	SUB0474	ABC transporter permease protein.	Metal cation ABC transporter ATP-binding protein.	0.919
SUB0112	mtsC	SUB0112	SUB0475	ABC transporter permease protein.	Metal cation ABC transporter membrane protein.	0.538
SUB0112	mtuA	SUB0112	SUB0473	ABC transporter permease protein.	Previously sequenced as Streptococcus uberis extracellular manganese-binding protein MtuA UniProt:Q70UQ6 (EMBL:SUB539135) (310 aa) fasta scores: E()=1.1e-111, 100.000% id in 310 aa; Belongs to the bacterial solute-binding protein 9 family.	0.884
SUB0978	SUB1717	SUB0978	SUB1717	GntR family regulatory protein.	Putative glycine-betaine binding permease protein.	0.778
SUB0978	SUB1718	SUB0978	SUB1718	GntR family regulatory protein.	Putative glycine betaine transport ATP-binding protein.	0.489