STRINGSTRING
SUB0012 SUB0012 pbp1B pbp1B SUB0586 SUB0586 SUB1197 SUB1197 SUB1198 SUB1198 SUB1241 SUB1241 pbp1A pbp1A pbpX pbpX dppF dppF dppD dppD dppC dppC dppB dppB dppA dppA pbp2A pbp2A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SUB0012Putative exported protein. (428 aa)
pbp1BPutative penicillin-binding protein 1B. (772 aa)
SUB0586Putative extracellular oligopeptide-binding protein; Similar to SUB1625, 69.853% identity (69.982% ungapped) in 544 aa overlap (4-547:9-551). (549 aa)
SUB1197Glycosyl hydrolase family protein. (574 aa)
SUB1198Glycosyl hydrolase family protein. (596 aa)
SUB1241Putative lipoprotein. (350 aa)
pbp1APutative penicillin-binding protein 1A. (739 aa)
pbpXPutative penicillin binding protein 2x. (750 aa)
dppFDi-tripeptide transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (311 aa)
dppDDi-tripeptide transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (348 aa)
dppCDi-tripeptide transporter permease protein. (343 aa)
dppBDi-tripeptide transport system permease protein. (304 aa)
dppAPutative peptide binding protein; Q93QH8_9LACT; Similar to SUB0586, 69.853% identity (69.982% ungapped) in 544 aa overlap (9-551:4-547). (552 aa)
pbp2APenicillin-binding protein 2a. (774 aa)
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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