STRINGSTRING
SDF06289.1 SDF06289.1 SDG59838.1 SDG59838.1 SDG59914.1 SDG59914.1 SDG59949.1 SDG59949.1 SDG59994.1 SDG59994.1 SDG60031.1 SDG60031.1 SDG60070.1 SDG60070.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDF06289.1Hypothetical protein. (299 aa)
SDG59838.1S-adenosylmethionine uptake transporter. (326 aa)
SDG59914.1ABC-2 type transport system ATP-binding protein. (309 aa)
SDG59949.1ABC-2 type transport system permease protein. (253 aa)
SDG59994.1Serine protease SohB. (236 aa)
SDG60031.1cation:H+ antiporter. (319 aa)
SDG60070.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (250 aa)
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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