Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFG24450.1 | SFG37601.1 | SAMN04488039_101224 | SAMN04488039_101663 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Cyanophycin synthetase. | 0.541 |
| SFG24450.1 | SFG46799.1 | SAMN04488039_101224 | SAMN04488039_101959 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Penicillin-binding protein 1A. | 0.906 |
| SFG24450.1 | SFG52284.1 | SAMN04488039_101224 | SAMN04488039_1011116 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Cell division protein FtsI (penicillin-binding protein 3). | 0.797 |
| SFG24450.1 | SFG59270.1 | SAMN04488039_101224 | SAMN04488039_1011340 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | N-acetylmuramoyl-L-alanine amidase. | 0.489 |
| SFG24450.1 | SFG84833.1 | SAMN04488039_101224 | SAMN04488039_10265 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.449 |
| SFG24450.1 | SFG98178.1 | SAMN04488039_101224 | SAMN04488039_102619 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Penicillin-binding protein, 1A family. | 0.906 |
| SFG24450.1 | SFH09167.1 | SAMN04488039_101224 | SAMN04488039_10338 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Peptidoglycan glycosyltransferase. | 0.745 |
| SFG24450.1 | SFH10083.1 | SAMN04488039_101224 | SAMN04488039_10379 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | 0.906 |
| SFG24450.1 | mraY | SAMN04488039_101224 | SAMN04488039_1011113 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.631 |
| SFG24450.1 | mtgA | SAMN04488039_101224 | SAMN04488039_102525 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.843 |
| SFG24450.1 | murF | SAMN04488039_101224 | SAMN04488039_1011114 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.624 |
| SFG37566.1 | SFG37601.1 | SAMN04488039_101662 | SAMN04488039_101663 | UDP-N-acetylmuramyl tripeptide synthase. | Cyanophycin synthetase. | 0.906 |
| SFG37566.1 | SFG39459.1 | SAMN04488039_101662 | SAMN04488039_101720 | UDP-N-acetylmuramyl tripeptide synthase. | Hypothetical protein. | 0.436 |
| SFG37566.1 | SFG52284.1 | SAMN04488039_101662 | SAMN04488039_1011116 | UDP-N-acetylmuramyl tripeptide synthase. | Cell division protein FtsI (penicillin-binding protein 3). | 0.819 |
| SFG37566.1 | SFH09167.1 | SAMN04488039_101662 | SAMN04488039_10338 | UDP-N-acetylmuramyl tripeptide synthase. | Peptidoglycan glycosyltransferase. | 0.564 |
| SFG37566.1 | ddl | SAMN04488039_101662 | SAMN04488039_1011101 | UDP-N-acetylmuramyl tripeptide synthase. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.813 |
| SFG37566.1 | mraY | SAMN04488039_101662 | SAMN04488039_1011113 | UDP-N-acetylmuramyl tripeptide synthase. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.812 |
| SFG37566.1 | murB | SAMN04488039_101662 | SAMN04488039_1011102 | UDP-N-acetylmuramyl tripeptide synthase. | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. | 0.551 |
| SFG37566.1 | murC | SAMN04488039_101662 | SAMN04488039_1011106 | UDP-N-acetylmuramyl tripeptide synthase. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.894 |
| SFG37566.1 | murD | SAMN04488039_101662 | SAMN04488039_1011111 | UDP-N-acetylmuramyl tripeptide synthase. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.813 |
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