STRINGSTRING
SEF32742.1 SEF32742.1 SEF32744.1 SEF32744.1 SEF32747.1 SEF32747.1 SEF34929.1 SEF34929.1 SEF34931.1 SEF34931.1 SEF34938.1 SEF34938.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SEF32742.1NADPH:quinone reductase. (309 aa)
SEF32744.1AraC-type DNA-binding protein. (247 aa)
SEF32747.1DivIVA domain-containing protein. (191 aa)
SEF34929.1Alpha/beta hydrolase fold. (493 aa)
SEF34931.1CubicO group peptidase, beta-lactamase class C family. (271 aa)
SEF34938.1GntR family transcriptional regulator. (262 aa)
Your Current Organism:
Amycolatopsis pretoriensis
NCBI taxonomy Id: 218821
Other names: A. pretoriensis, Amycolatopsis pretoriensis Labeda et al. 2003, DSM 44654, JCM 12673, NRRL B-24133, strain ARC OV1 0181
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