Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEF23962.1 | SEF38284.1 | SAMN05421837_102498 | SAMN05421837_1208 | Argininosuccinate lyase. | Arginosuccinate synthase. | 0.891 |
| SEF23962.1 | SEF38286.1 | SAMN05421837_102498 | SAMN05421837_12010 | Argininosuccinate lyase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.975 |
| SEF23962.1 | argB | SAMN05421837_102498 | SAMN05421837_12012 | Argininosuccinate lyase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.975 |
| SEF23962.1 | argC | SAMN05421837_102498 | SAMN05421837_12014 | Argininosuccinate lyase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.957 |
| SEF23962.1 | argD | SAMN05421837_102498 | SAMN05421837_12011 | Argininosuccinate lyase. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.972 |
| SEF23962.1 | argG | SAMN05421837_102498 | SAMN05421837_101801 | Argininosuccinate lyase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.981 |
| SEF23962.1 | argH | SAMN05421837_102498 | SAMN05421837_1207 | Argininosuccinate lyase. | Argininosuccinate lyase. | 0.781 |
| SEF23962.1 | argJ | SAMN05421837_102498 | SAMN05421837_12013 | Argininosuccinate lyase. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.950 |
| SEF23962.1 | argR | SAMN05421837_102498 | SAMN05421837_1209 | Argininosuccinate lyase. | Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | 0.938 |
| SEF38284.1 | SEF23962.1 | SAMN05421837_1208 | SAMN05421837_102498 | Arginosuccinate synthase. | Argininosuccinate lyase. | 0.891 |
| SEF38284.1 | SEF38286.1 | SAMN05421837_1208 | SAMN05421837_12010 | Arginosuccinate synthase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.986 |
| SEF38284.1 | argB | SAMN05421837_1208 | SAMN05421837_12012 | Arginosuccinate synthase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.969 |
| SEF38284.1 | argC | SAMN05421837_1208 | SAMN05421837_12014 | Arginosuccinate synthase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.969 |
| SEF38284.1 | argD | SAMN05421837_1208 | SAMN05421837_12011 | Arginosuccinate synthase. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.962 |
| SEF38284.1 | argH | SAMN05421837_1208 | SAMN05421837_1207 | Arginosuccinate synthase. | Argininosuccinate lyase. | 0.963 |
| SEF38284.1 | argJ | SAMN05421837_1208 | SAMN05421837_12013 | Arginosuccinate synthase. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.966 |
| SEF38284.1 | argR | SAMN05421837_1208 | SAMN05421837_1209 | Arginosuccinate synthase. | Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | 0.957 |
| SEF38286.1 | SEF23962.1 | SAMN05421837_12010 | SAMN05421837_102498 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate lyase. | 0.975 |
| SEF38286.1 | SEF38284.1 | SAMN05421837_12010 | SAMN05421837_1208 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginosuccinate synthase. | 0.986 |
| SEF38286.1 | argB | SAMN05421837_12010 | SAMN05421837_12012 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.999 |
page 1 of 5