(5 nodes) RNA polymerase II, core complex network (Aquilegia coerulea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G5C775	RPOLD domain-containing protein. (215 aa)
	A0A2G5D817	RNA_pol_L_2 domain-containing protein. (116 aa)
	A0A2G5DWL1	RPOL4c domain-containing protein. (139 aa)
	A0A2G5E1G5	Uncharacterized protein. (144 aa)
	A0A2G5EZH6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)

Your Current Organism:

Aquilegia coerulea

NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G5C775	A0A2G5D817	RPOLD domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.993
A0A2G5C775	A0A2G5DWL1	RPOLD domain-containing protein.	RPOL4c domain-containing protein.	0.992
A0A2G5C775	A0A2G5E1G5	RPOLD domain-containing protein.	Uncharacterized protein.	0.996
A0A2G5C775	A0A2G5EZH6	RPOLD domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.993
A0A2G5D817	A0A2G5C775	RNA_pol_L_2 domain-containing protein.	RPOLD domain-containing protein.	0.993
A0A2G5D817	A0A2G5DWL1	RNA_pol_L_2 domain-containing protein.	RPOL4c domain-containing protein.	0.999
A0A2G5D817	A0A2G5E1G5	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.996
A0A2G5D817	A0A2G5EZH6	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
A0A2G5DWL1	A0A2G5C775	RPOL4c domain-containing protein.	RPOLD domain-containing protein.	0.992
A0A2G5DWL1	A0A2G5D817	RPOL4c domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.999
A0A2G5DWL1	A0A2G5E1G5	RPOL4c domain-containing protein.	Uncharacterized protein.	0.993
A0A2G5DWL1	A0A2G5EZH6	RPOL4c domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
A0A2G5E1G5	A0A2G5C775	Uncharacterized protein.	RPOLD domain-containing protein.	0.996
A0A2G5E1G5	A0A2G5D817	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.996
A0A2G5E1G5	A0A2G5DWL1	Uncharacterized protein.	RPOL4c domain-containing protein.	0.993
A0A2G5E1G5	A0A2G5EZH6	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.998
A0A2G5EZH6	A0A2G5C775	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	RPOLD domain-containing protein.	0.993
A0A2G5EZH6	A0A2G5D817	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	RNA_pol_L_2 domain-containing protein.	0.999
A0A2G5EZH6	A0A2G5DWL1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	RPOL4c domain-containing protein.	0.999
A0A2G5EZH6	A0A2G5E1G5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.998