29 items (Aquilegia coerulea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G5C0T5	GH16 domain-containing protein. (200 aa)
	A0A2G5C1F0	Galectin domain-containing protein. (733 aa)
	A0A2G5C4E6	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (320 aa)
	A0A2G5C4F6	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (325 aa)
	A0A2G5C4F7	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (322 aa)
	A0A2G5C509	Uncharacterized protein. (559 aa)
	A0A2G5C674	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (353 aa)
	A0A2G5CH88	Gb3_synth domain-containing protein. (454 aa)
	A0A2G5CJ77	SAM-dependent MTase DRM-type domain-containing protein. (540 aa)
	A0A2G5CJW2	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (400 aa)
	A0A2G5CLJ9	Gb3_synth domain-containing protein. (416 aa)
	A0A2G5CR76	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (226 aa)
	A0A2G5CRF8	Uncharacterized protein. (144 aa)
	A0A2G5CUC1	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (406 aa)
	A0A2G5D2N1	Gb3_synth domain-containing protein. (647 aa)
	A0A2G5DAK1	Galectin domain-containing protein. (681 aa)
	A0A2G5DF07	Uncharacterized protein. (486 aa)
	A0A2G5DHM5	Uncharacterized protein. (597 aa)
	A0A2G5DJM7	Uncharacterized protein. (455 aa)
	A0A2G5DUX8	Uncharacterized protein. (406 aa)
	A0A2G5EBE0	Uncharacterized protein. (417 aa)
	A0A2G5EGY7	Uncharacterized protein. (431 aa)
	A0A2G5ETD6	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (421 aa)
	A0A2G5ETE0	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (439 aa)
	A0A2G5EYK3	Galectin domain-containing protein. (630 aa)
	A0A2G5F327	Galectin domain-containing protein. (647 aa)
	A0A2G5F3C3	Uncharacterized protein. (449 aa)
	A0A2G5F480	Galectin domain-containing protein. (629 aa)
	A0A2G5F6I8	Uncharacterized protein. (402 aa)

Your Current Organism:

Aquilegia coerulea

NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G5C0T5	A0A2G5CR76	GH16 domain-containing protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.400
A0A2G5C1F0	A0A2G5C509	Galectin domain-containing protein.	Uncharacterized protein.	0.513
A0A2G5C1F0	A0A2G5C674	Galectin domain-containing protein.	Hexosyltransferase; Belongs to the glycosyltransferase 31 family.	0.548
A0A2G5C1F0	A0A2G5CJW2	Galectin domain-containing protein.	Hexosyltransferase; Belongs to the glycosyltransferase 31 family.	0.653
A0A2G5C1F0	A0A2G5CUC1	Galectin domain-containing protein.	Hexosyltransferase; Belongs to the glycosyltransferase 31 family.	0.657
A0A2G5C1F0	A0A2G5DUX8	Galectin domain-containing protein.	Uncharacterized protein.	0.860
A0A2G5C1F0	A0A2G5EBE0	Galectin domain-containing protein.	Uncharacterized protein.	0.593
A0A2G5C1F0	A0A2G5ETD6	Galectin domain-containing protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.638
A0A2G5C1F0	A0A2G5EYK3	Galectin domain-containing protein.	Galectin domain-containing protein.	0.686
A0A2G5C1F0	A0A2G5F3C3	Galectin domain-containing protein.	Uncharacterized protein.	0.527
A0A2G5C1F0	A0A2G5F480	Galectin domain-containing protein.	Galectin domain-containing protein.	0.680
A0A2G5C4E6	A0A2G5DUX8	Hexosyltransferase; Belongs to the glycosyltransferase 31 family.	Uncharacterized protein.	0.503
A0A2G5C4F6	A0A2G5DUX8	Hexosyltransferase; Belongs to the glycosyltransferase 31 family.	Uncharacterized protein.	0.503
A0A2G5C4F7	A0A2G5DUX8	Hexosyltransferase; Belongs to the glycosyltransferase 31 family.	Uncharacterized protein.	0.503
A0A2G5C509	A0A2G5C1F0	Uncharacterized protein.	Galectin domain-containing protein.	0.513
A0A2G5C509	A0A2G5C674	Uncharacterized protein.	Hexosyltransferase; Belongs to the glycosyltransferase 31 family.	0.405
A0A2G5C509	A0A2G5CJW2	Uncharacterized protein.	Hexosyltransferase; Belongs to the glycosyltransferase 31 family.	0.504
A0A2G5C509	A0A2G5CUC1	Uncharacterized protein.	Hexosyltransferase; Belongs to the glycosyltransferase 31 family.	0.519
A0A2G5C509	A0A2G5D2N1	Uncharacterized protein.	Gb3_synth domain-containing protein.	0.403
A0A2G5C509	A0A2G5EBE0	Uncharacterized protein.	Uncharacterized protein.	0.517