(8 nodes) Meiotic DNA double-strand break formation network (Aquilegia coerulea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G5D5F7	TP6A_N domain-containing protein. (383 aa)
	A0A2G5CEV4	Uncharacterized protein. (1236 aa)
	A0A2G5F7C4	TP6A_N domain-containing protein. (195 aa)
	A0A2G5F1T4	Uncharacterized protein. (412 aa)
	A0A2G5DQW9	Uncharacterized protein. (368 aa)
	A0A2G5EUX4	Uncharacterized protein. (238 aa)
	A0A2G5C2W5	TP6A_N domain-containing protein. (367 aa)
	TOP6A	DNA topoisomerase 6 subunit A; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. (429 aa)

Your Current Organism:

Aquilegia coerulea

NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G5C2W5	A0A2G5CEV4	TP6A_N domain-containing protein.	Uncharacterized protein.	0.574
A0A2G5C2W5	A0A2G5D5F7	TP6A_N domain-containing protein.	TP6A_N domain-containing protein.	0.615
A0A2G5C2W5	A0A2G5DQW9	TP6A_N domain-containing protein.	Uncharacterized protein.	0.522
A0A2G5C2W5	A0A2G5EUX4	TP6A_N domain-containing protein.	Uncharacterized protein.	0.414
A0A2G5C2W5	A0A2G5F1T4	TP6A_N domain-containing protein.	Uncharacterized protein.	0.579
A0A2G5CEV4	A0A2G5C2W5	Uncharacterized protein.	TP6A_N domain-containing protein.	0.574
A0A2G5CEV4	A0A2G5D5F7	Uncharacterized protein.	TP6A_N domain-containing protein.	0.529
A0A2G5CEV4	A0A2G5DQW9	Uncharacterized protein.	Uncharacterized protein.	0.529
A0A2G5CEV4	A0A2G5EUX4	Uncharacterized protein.	Uncharacterized protein.	0.520
A0A2G5CEV4	A0A2G5F1T4	Uncharacterized protein.	Uncharacterized protein.	0.519
A0A2G5D5F7	A0A2G5C2W5	TP6A_N domain-containing protein.	TP6A_N domain-containing protein.	0.615
A0A2G5D5F7	A0A2G5CEV4	TP6A_N domain-containing protein.	Uncharacterized protein.	0.529
A0A2G5D5F7	A0A2G5DQW9	TP6A_N domain-containing protein.	Uncharacterized protein.	0.523
A0A2G5D5F7	A0A2G5EUX4	TP6A_N domain-containing protein.	Uncharacterized protein.	0.445
A0A2G5D5F7	A0A2G5F1T4	TP6A_N domain-containing protein.	Uncharacterized protein.	0.583
A0A2G5DQW9	A0A2G5C2W5	Uncharacterized protein.	TP6A_N domain-containing protein.	0.522
A0A2G5DQW9	A0A2G5CEV4	Uncharacterized protein.	Uncharacterized protein.	0.529
A0A2G5DQW9	A0A2G5D5F7	Uncharacterized protein.	TP6A_N domain-containing protein.	0.523
A0A2G5DQW9	A0A2G5EUX4	Uncharacterized protein.	Uncharacterized protein.	0.519
A0A2G5DQW9	A0A2G5F1T4	Uncharacterized protein.	Uncharacterized protein.	0.519