(4 nodes) DNA-directed RNA polymerase, RpoA/D/Rpb3-type network (Aquilegia coerulea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G5DIX2	RPOLD domain-containing protein. (108 aa)
	A0A2G5C775	RPOLD domain-containing protein. (215 aa)
	A0A2G5C781	RPOLD domain-containing protein. (346 aa)
	A0A2G5EKH0	RPOLD domain-containing protein. (391 aa)

Your Current Organism:

Aquilegia coerulea

NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G5C775	A0A2G5DIX2	RPOLD domain-containing protein.	RPOLD domain-containing protein.	0.898
A0A2G5C775	A0A2G5EKH0	RPOLD domain-containing protein.	RPOLD domain-containing protein.	0.753
A0A2G5C781	A0A2G5DIX2	RPOLD domain-containing protein.	RPOLD domain-containing protein.	0.898
A0A2G5C781	A0A2G5EKH0	RPOLD domain-containing protein.	RPOLD domain-containing protein.	0.753
A0A2G5DIX2	A0A2G5C775	RPOLD domain-containing protein.	RPOLD domain-containing protein.	0.898
A0A2G5DIX2	A0A2G5C781	RPOLD domain-containing protein.	RPOLD domain-containing protein.	0.898
A0A2G5DIX2	A0A2G5EKH0	RPOLD domain-containing protein.	RPOLD domain-containing protein.	0.898
A0A2G5EKH0	A0A2G5C775	RPOLD domain-containing protein.	RPOLD domain-containing protein.	0.753
A0A2G5EKH0	A0A2G5C781	RPOLD domain-containing protein.	RPOLD domain-containing protein.	0.753
A0A2G5EKH0	A0A2G5DIX2	RPOLD domain-containing protein.	RPOLD domain-containing protein.	0.898