(58 nodes) Zinc finger, PHD-finger network (Aquilegia coerulea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G5CU39	Uncharacterized protein. (1346 aa)
	A0A2G5CU28	Uncharacterized protein. (1341 aa)
	A0A2G5CTU3	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1071 aa)
	A0A2G5CSD0	Uncharacterized protein. (1852 aa)
	A0A2G5CQG2	Uncharacterized protein. (818 aa)
	A0A2G5CPW5	Uncharacterized protein. (816 aa)
	A0A2G5CN22	Uncharacterized protein. (1114 aa)
	A0A2G5CLW7	PHD-type domain-containing protein. (242 aa)
	A0A2G5CKD0	Uncharacterized protein. (1684 aa)
	A0A2G5CII0	Uncharacterized protein. (1531 aa)
	A0A2G5CGL6	Uncharacterized protein. (898 aa)
	A0A2G5CEZ2	Uncharacterized protein. (1119 aa)
	A0A2G5CA04	Uncharacterized protein. (1166 aa)
	A0A2G5C8Y0	PHD-type domain-containing protein. (259 aa)
	A0A2G5C6V6	Uncharacterized protein. (1209 aa)
	A0A2G5EGM2	PHD-type domain-containing protein. (934 aa)
	A0A2G5D1Q6	Uncharacterized protein. (467 aa)
	A0A2G5D2B5	PHD-type domain-containing protein. (1221 aa)
	A0A2G5D2F0	Uncharacterized protein. (2375 aa)
	A0A2G5D3Z0	Uncharacterized protein. (684 aa)
	A0A2G5D636	PHD-type domain-containing protein. (1391 aa)
	A0A2G5D8R7	PHD-type domain-containing protein. (1595 aa)
	A0A2G5DB68	PHD-type domain-containing protein. (1058 aa)
	A0A2G5DBT9	Uncharacterized protein. (577 aa)
	A0A2G5DCW1	Uncharacterized protein. (365 aa)
	A0A2G5DEH0	Uncharacterized protein. (407 aa)
	A0A2G5DER5	Uncharacterized protein. (607 aa)
	A0A2G5DHN9	PHD-type domain-containing protein. (255 aa)
	A0A2G5DJ98	PHD-type domain-containing protein. (1113 aa)
	A0A2G5DJR4	Uncharacterized protein. (533 aa)
	A0A2G5DJS6	Uncharacterized protein. (725 aa)
	A0A2G5DN34	PHD-type domain-containing protein. (1557 aa)
	A0A2G5DP11	Uncharacterized protein. (510 aa)
	A0A2G5DQ49	Uncharacterized protein. (2088 aa)
	A0A2G5DS07	PHD-type domain-containing protein. (66 aa)
	A0A2G5DU45	PHD domain-containing protein. (830 aa)
	A0A2G5DWA6	Uncharacterized protein. (379 aa)
	A0A2G5DXL6	Uncharacterized protein. (1835 aa)
	A0A2G5DXZ1	PHD finger protein ING. (253 aa)
	A0A2G5DYJ7	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (813 aa)
	A0A2G5DYV0	Uncharacterized protein. (919 aa)
	A0A2G5DZV6	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1112 aa)
	A0A2G5E031	Uncharacterized protein. (350 aa)
	A0A2G5E459	Uncharacterized protein. (138 aa)
	A0A2G5EE82	PHD finger protein ING. (253 aa)
	A0A2G5D0C6	Uncharacterized protein. (1692 aa)
	A0A2G5EGW5	Uncharacterized protein. (1709 aa)
	A0A2G5EN62	Uncharacterized protein. (1533 aa)
	A0A2G5ESL0	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (752 aa)
	A0A2G5EUM6	PHD-type domain-containing protein. (240 aa)
	A0A2G5EUR8	Uncharacterized protein. (1181 aa)
	A0A2G5EYX2	Uncharacterized protein. (1404 aa)
	A0A2G5F266	Uncharacterized protein. (2170 aa)
	A0A2G5F4V7	Sister chromatid cohesion protein. (1601 aa)
	A0A2G5F5K8	Uncharacterized protein. (670 aa)
	A0A2G5F7H4	Uncharacterized protein. (748 aa)
	A0A2G5CZV6	Uncharacterized protein. (216 aa)
	A0A2G5CXY9	PHD finger protein ING. (233 aa)

Your Current Organism:

Aquilegia coerulea

NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G5C6V6	A0A2G5CSD0	Uncharacterized protein.	Uncharacterized protein.	0.779
A0A2G5CEZ2	A0A2G5CZV6	Uncharacterized protein.	Uncharacterized protein.	0.488
A0A2G5CEZ2	A0A2G5D0C6	Uncharacterized protein.	Uncharacterized protein.	0.484
A0A2G5CEZ2	A0A2G5DEH0	Uncharacterized protein.	Uncharacterized protein.	0.403
A0A2G5CEZ2	A0A2G5DQ49	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A2G5CEZ2	A0A2G5DS07	Uncharacterized protein.	PHD-type domain-containing protein.	0.488
A0A2G5CEZ2	A0A2G5DU45	Uncharacterized protein.	PHD domain-containing protein.	0.450
A0A2G5CEZ2	A0A2G5DXL6	Uncharacterized protein.	Uncharacterized protein.	0.403
A0A2G5CEZ2	A0A2G5DYV0	Uncharacterized protein.	Uncharacterized protein.	0.403
A0A2G5CEZ2	A0A2G5E459	Uncharacterized protein.	Uncharacterized protein.	0.488
A0A2G5CII0	A0A2G5CXY9	Uncharacterized protein.	PHD finger protein ING.	0.435
A0A2G5CII0	A0A2G5DXL6	Uncharacterized protein.	Uncharacterized protein.	0.469
A0A2G5CII0	A0A2G5DXZ1	Uncharacterized protein.	PHD finger protein ING.	0.435
A0A2G5CII0	A0A2G5EE82	Uncharacterized protein.	PHD finger protein ING.	0.435
A0A2G5CII0	A0A2G5F266	Uncharacterized protein.	Uncharacterized protein.	0.413
A0A2G5CSD0	A0A2G5C6V6	Uncharacterized protein.	Uncharacterized protein.	0.779
A0A2G5CSD0	A0A2G5DJS6	Uncharacterized protein.	Uncharacterized protein.	0.596
A0A2G5CTU3	A0A2G5CZV6	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Uncharacterized protein.	0.488
A0A2G5CTU3	A0A2G5D0C6	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Uncharacterized protein.	0.484
A0A2G5CTU3	A0A2G5DEH0	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Uncharacterized protein.	0.403