(23 nodes) Ubiquitin conserved site network (Aquilegia coerulea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G5CR29	Uncharacterized protein. (230 aa)
	A0A2G5E7Q6	Uncharacterized protein. (276 aa)
	A0A2G5C4D0	Ubiquitin-like domain-containing protein. (128 aa)
	A0A2G5CN13	Uncharacterized protein. (457 aa)
	A0A2G5CNV8	Uncharacterized protein. (381 aa)
	A0A2G5CPW7	Uncharacterized protein. (154 aa)
	A0A2G5D809	Ubiquitin-like domain-containing protein. (946 aa)
	A0A2G5CZW8	Uncharacterized protein. (278 aa)
	A0A2G5CUA0	Ubiquitin-like domain-containing protein. (137 aa)
	A0A2G5EYJ5	Ubiquitin-like domain-containing protein. (156 aa)
	A0A2G5EZI6	Uncharacterized protein. (214 aa)
	A0A2G5F1J1	Ubiquitin-like domain-containing protein. (157 aa)
	A0A2G5ESI0	Uncharacterized protein. (457 aa)
	A0A2G5CC07	Uncharacterized protein. (381 aa)
	A0A2G5F260	Uncharacterized protein. (153 aa)
	A0A2G5F493	Uncharacterized protein. (396 aa)
	A0A2G5F8Z5	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (480 aa)
	A0A2G5EH43	Uncharacterized protein. (381 aa)
	A0A2G5EGM7	Uncharacterized protein. (360 aa)
	A0A2G5CSV0	Uncharacterized protein. (228 aa)
	A0A2G5CDX3	Ubiquitin-like domain-containing protein. (656 aa)
	A0A2G5CIT0	Uncharacterized protein. (533 aa)
	A0A2G5CKP2	Uncharacterized protein. (784 aa)

Your Current Organism:

Aquilegia coerulea

NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G5C4D0	A0A2G5CC07	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.666
A0A2G5C4D0	A0A2G5CIT0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.666
A0A2G5C4D0	A0A2G5CKP2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.666
A0A2G5C4D0	A0A2G5CN13	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.666
A0A2G5C4D0	A0A2G5CNV8	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.666
A0A2G5C4D0	A0A2G5CPW7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.673
A0A2G5C4D0	A0A2G5CR29	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.669
A0A2G5C4D0	A0A2G5CSV0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.681
A0A2G5C4D0	A0A2G5CUA0	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.986
A0A2G5C4D0	A0A2G5CZW8	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.666
A0A2G5C4D0	A0A2G5E7Q6	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.666
A0A2G5C4D0	A0A2G5EGM7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.666
A0A2G5C4D0	A0A2G5EH43	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.666
A0A2G5C4D0	A0A2G5ESI0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.666
A0A2G5C4D0	A0A2G5EZI6	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.671
A0A2G5C4D0	A0A2G5F260	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.672
A0A2G5C4D0	A0A2G5F493	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.666
A0A2G5C4D0	A0A2G5F8Z5	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	0.874
A0A2G5CC07	A0A2G5C4D0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.666
A0A2G5CC07	A0A2G5CUA0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.717