(35 nodes) Myb/SANT-like DNA-binding domain network (Aquilegia coerulea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G5EZN2	Uncharacterized protein. (545 aa)
	A0A2G5ESY8	Myb_DNA-bind_3 domain-containing protein. (294 aa)
	A0A2G5EST7	Myb_DNA-bind_3 domain-containing protein. (405 aa)
	A0A2G5ENP7	Myb_DNA-bind_3 domain-containing protein. (342 aa)
	A0A2G5ENG3	Myb_DNA-bind_3 domain-containing protein. (272 aa)
	A0A2G5ELG4	Myb_DNA-bind_3 domain-containing protein. (262 aa)
	A0A2G5ELB2	Myb_DNA-bind_3 domain-containing protein. (310 aa)
	A0A2G5EDR7	Uncharacterized protein. (775 aa)
	A0A2G5E7H7	Uncharacterized protein. (655 aa)
	A0A2G5E4C7	Myb_DNA-bind_3 domain-containing protein. (216 aa)
	A0A2G5DSJ1	Myb_DNA-bind_3 domain-containing protein. (167 aa)
	A0A2G5DNU7	Myb_DNA-bind_3 domain-containing protein. (149 aa)
	A0A2G5DM54	Myb_DNA-bind_3 domain-containing protein. (310 aa)
	A0A2G5DKY5	Myb_DNA-bind_3 domain-containing protein. (280 aa)
	A0A2G5DG69	Uncharacterized protein. (572 aa)
	A0A2G5DCU6	Myb_DNA-bind_3 domain-containing protein. (247 aa)
	A0A2G5DBL2	Myb_DNA-bind_3 domain-containing protein. (205 aa)
	A0A2G5D8Q4	Myb_DNA-bind_3 domain-containing protein. (416 aa)
	A0A2G5D5N2	Myb_DNA-bind_3 domain-containing protein. (751 aa)
	A0A2G5CX84	Myb_DNA-bind_3 domain-containing protein. (204 aa)
	A0A2G5CVR1	Myb_DNA-bind_3 domain-containing protein. (92 aa)
	A0A2G5CQL6	Myb_DNA-bind_3 domain-containing protein. (262 aa)
	A0A2G5CM05	Myb_DNA-bind_3 domain-containing protein. (138 aa)
	A0A2G5CDX3	Ubiquitin-like domain-containing protein. (656 aa)
	A0A2G5CCS9	Myb_DNA-bind_3 domain-containing protein. (188 aa)
	A0A2G5CA57	Myb_DNA-bind_3 domain-containing protein. (303 aa)
	A0A2G5C9Y9	Myb_DNA-bind_3 domain-containing protein. (138 aa)
	A0A2G5C7V3	Myb_DNA-bind_3 domain-containing protein. (239 aa)
	A0A2G5C7M2	Myb_DNA-bind_3 domain-containing protein. (116 aa)
	A0A2G5C6R2	Myb_DNA-bind_3 domain-containing protein. (246 aa)
	A0A2G5C533	Myb_DNA-bind_3 domain-containing protein. (306 aa)
	A0A2G5C344	Myb_DNA-bind_3 domain-containing protein. (262 aa)
	A0A2G5EZQ8	Uncharacterized protein. (574 aa)
	A0A2G5F8F8	Myb_DNA-bind_3 domain-containing protein. (252 aa)
	A0A2G5FBU0	Myb_DNA-bind_3 domain-containing protein. (214 aa)

Your Current Organism:

Aquilegia coerulea

NCBI taxonomy Id: 218851
Other names: A. coerulea, Aquilegia caerulea, Rocky Mountain columbine

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G5C6R2	A0A2G5DBL2	Myb_DNA-bind_3 domain-containing protein.	Myb_DNA-bind_3 domain-containing protein.	0.429
A0A2G5C6R2	A0A2G5ELB2	Myb_DNA-bind_3 domain-containing protein.	Myb_DNA-bind_3 domain-containing protein.	0.442
A0A2G5CQL6	A0A2G5DBL2	Myb_DNA-bind_3 domain-containing protein.	Myb_DNA-bind_3 domain-containing protein.	0.418
A0A2G5CQL6	A0A2G5ELB2	Myb_DNA-bind_3 domain-containing protein.	Myb_DNA-bind_3 domain-containing protein.	0.422
A0A2G5DBL2	A0A2G5C6R2	Myb_DNA-bind_3 domain-containing protein.	Myb_DNA-bind_3 domain-containing protein.	0.429
A0A2G5DBL2	A0A2G5CQL6	Myb_DNA-bind_3 domain-containing protein.	Myb_DNA-bind_3 domain-containing protein.	0.418
A0A2G5DBL2	A0A2G5DCU6	Myb_DNA-bind_3 domain-containing protein.	Myb_DNA-bind_3 domain-containing protein.	0.462
A0A2G5DBL2	A0A2G5ELB2	Myb_DNA-bind_3 domain-containing protein.	Myb_DNA-bind_3 domain-containing protein.	0.512
A0A2G5DCU6	A0A2G5DBL2	Myb_DNA-bind_3 domain-containing protein.	Myb_DNA-bind_3 domain-containing protein.	0.462
A0A2G5ELB2	A0A2G5C6R2	Myb_DNA-bind_3 domain-containing protein.	Myb_DNA-bind_3 domain-containing protein.	0.442
A0A2G5ELB2	A0A2G5CQL6	Myb_DNA-bind_3 domain-containing protein.	Myb_DNA-bind_3 domain-containing protein.	0.422
A0A2G5ELB2	A0A2G5DBL2	Myb_DNA-bind_3 domain-containing protein.	Myb_DNA-bind_3 domain-containing protein.	0.512