STRINGSTRING
A7J50_0190 A7J50_0190 A7J50_0191 A7J50_0191 A7J50_0394 A7J50_0394 fumC fumC mqo mqo mqo-2 mqo-2 A7J50_2666 A7J50_2666 A7J50_2940 A7J50_2940 fumC-2 fumC-2 A7J50_4721 A7J50_4721
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A7J50_0190Succinate-semialdehyde dehdyrogenase; Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. (480 aa)
A7J50_0191Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (425 aa)
A7J50_0394Pfam:pfam03949 Malic enzyme, NAD binding domain. (422 aa)
fumCFumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (458 aa)
mqoPfam:pfam06039 Malate:quinone oxidoreductase (Mqo). (502 aa)
mqo-2Pfam:pfam06039 Malate:quinone oxidoreductase (Mqo). (551 aa)
A7J50_2666Succinate-semialdehyde dehdyrogenase; Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. (477 aa)
A7J50_2940Succinate-semialdehyde dehdyrogenase; Pfam:pfam00171 Aldehyde dehydrogenase family. (476 aa)
fumC-2Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (462 aa)
A7J50_4721Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (507 aa)
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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