STRINGSTRING
A7J50_0027 A7J50_0027 A7J50_0028 A7J50_0028 A7J50_0029 A7J50_0029 A7J50_0030 A7J50_0030 A7J50_0031 A7J50_0031 A7J50_0032 A7J50_0032 A7J50_0033 A7J50_0033 A7J50_0034 A7J50_0034 A7J50_0125 A7J50_0125 A7J50_0854 A7J50_0854 A7J50_0856 A7J50_0856 A7J50_0858 A7J50_0858 A7J50_0859 A7J50_0859 A7J50_1823 A7J50_1823 A7J50_1824 A7J50_1824 A7J50_1825 A7J50_1825 A7J50_2679 A7J50_2679 A7J50_2680 A7J50_2680 A7J50_3205 A7J50_3205 A7J50_3206 A7J50_3206 A7J50_3207 A7J50_3207 A7J50_3348 A7J50_3348 A7J50_3349 A7J50_3349 A7J50_3353 A7J50_3353 A7J50_3358 A7J50_3358 A7J50_3602 A7J50_3602 A7J50_3603 A7J50_3603 A7J50_3604 A7J50_3604 A7J50_3606 A7J50_3606 A7J50_3607 A7J50_3607 A7J50_3608 A7J50_3608 A7J50_3641 A7J50_3641 A7J50_3917 A7J50_3917 A7J50_3918 A7J50_3918 A7J50_3919 A7J50_3919 A7J50_3920 A7J50_3920 A7J50_3921 A7J50_3921 A7J50_3922 A7J50_3922 A7J50_4196 A7J50_4196 A7J50_4286 A7J50_4286 A7J50_4291 A7J50_4291 A7J50_4333 A7J50_4333 A7J50_5023 A7J50_5023 A7J50_5024 A7J50_5024 A7J50_5025 A7J50_5025 A7J50_5026 A7J50_5026 A7J50_5632 A7J50_5632
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A7J50_0027Protein ProX; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system. (306 aa)
A7J50_0028Choline-sulfatase; Pfam:pfam00884 Sulfatase. (504 aa)
A7J50_0029LysR family transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family. (316 aa)
A7J50_00304,5-dioxygenase; Pfam:pfam08883 Dopa 4,5-dioxygenase family. (108 aa)
A7J50_00312-dehydro-3-deoxygalactonokinase; Pfam:pfam05035 2-keto-3-deoxy-galactonokinase. (319 aa)
A7J50_0032Pfam:pfam01081 KDPG and KHG aldolase. (206 aa)
A7J50_0033Galactonate dehydratase; Pfam:pfam13378 Enolase C-terminal domain-like. (382 aa)
A7J50_0034D-galactonate transporter; Pfam:pfam07690 Major Facilitator Superfamily. (433 aa)
A7J50_0125GntR family transcriptional regulator; Pfam:pfam07729 FCD domain. (236 aa)
A7J50_0854GntR family transcriptional regulator; Pfam:pfam07729 FCD domain. (249 aa)
A7J50_08565-dehydro-4-deoxyglucarate dehydratase; Pfam:pfam00701 Dihydrodipicolinate synthetase family; Belongs to the DapA family. (303 aa)
A7J50_0858Glucarate transporter; Pfam:pfam07690 Major Facilitator Superfamily. (454 aa)
A7J50_0859Pfam:pfam04295 D-galactarate dehydratase / Altronate hydrolase, C terminus. (517 aa)
A7J50_1823TetR family transcriptional regulator. (192 aa)
A7J50_1824Pfam:pfam00392 Bacterial regulatory proteins, gntR family. (214 aa)
A7J50_1825Hypothetical protein; Pfam:pfam09347 Domain of unknown function (DUF1989). (282 aa)
A7J50_2679MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily. (436 aa)
A7J50_2680Mandelate racemase; Pfam:pfam13378 Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (405 aa)
A7J50_3205Putative GntR-family regulatory protein; Pfam:pfam07729 FCD domain. (233 aa)
A7J50_3206GntR family transcriptional regulator; Pfam:pfam07729 FCD domain. (251 aa)
A7J50_3207Hypothetical protein. (209 aa)
A7J50_33483-oxoacyl-ACP reductase; Pfam:pfam00106 short chain dehydrogenase. (255 aa)
A7J50_3349Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (382 aa)
A7J50_3353Senescence marker protein-30 family protein; Pfam:pfam08450 SMP-30/Gluconolaconase/LRE-like region. (287 aa)
A7J50_3358GntR family transcriptional regulator; Pfam:pfam07729 FCD domain. (240 aa)
A7J50_3602Pfam:pfam13508 Acetyltransferase (GNAT) domain. (155 aa)
A7J50_3603Putative copper resistance protein; Pfam:pfam04234 CopC domain. (121 aa)
A7J50_3604Copper resistance protein D. (285 aa)
A7J50_3606Pfam:pfam01370 NAD dependent epimerase/dehydratase family. (274 aa)
A7J50_3607Gluconolactonase; Pfam:pfam08450 SMP-30/Gluconolaconase/LRE-like region. (291 aa)
A7J50_3608Pfam:pfam01263 Aldose 1-epimerase. (296 aa)
A7J50_3641Pfam:pfam00392 Bacterial regulatory proteins, gntR family. (256 aa)
A7J50_3917Pfam:pfam11342 Protein of unknown function (DUF3144). (99 aa)
A7J50_3918Pfam:pfam00587 tRNA synthetase class II core domain (G, H, P, S and T). (190 aa)
A7J50_3919SAM-dependent methyltransferase; Pfam:pfam04816 Family of unknown function (DUF633). (243 aa)
A7J50_3920GntR family transcriptional regulator; Pfam:pfam07729 FCD domain. (237 aa)
A7J50_3921MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily. (453 aa)
A7J50_3922Glucarate dehydratase; Pfam:pfam13378 Enolase C-terminal domain-like. (444 aa)
A7J50_4196FAD dependent oxidoreductase. (693 aa)
A7J50_4286Pfam:pfam00392 Bacterial regulatory proteins, gntR family. (219 aa)
A7J50_4291GntR family transcriptional regulator; Pfam:pfam07729 FCD domain. (254 aa)
A7J50_4333GntR family transcriptional regulator; Pfam:pfam07729 FCD domain. (240 aa)
A7J50_5023Pfam:pfam00392 Bacterial regulatory proteins, gntR family. (255 aa)
A7J50_5024L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (564 aa)
A7J50_50254Fe-4S ferredoxin; Pfam:pfam02913 FAD linked oxidases, C-terminal domain. (936 aa)
A7J50_5026tmRNA. (92 aa)
A7J50_5632GntR family transcriptional regulator; Pfam:pfam07729 FCD domain. (231 aa)
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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