STRINGSTRING
A7J50_0054 A7J50_0054 A7J50_0059 A7J50_0059 A7J50_0060 A7J50_0060 A7J50_0073 A7J50_0073 A7J50_0084 A7J50_0084 A7J50_0085 A7J50_0085 A7J50_0126 A7J50_0126 A7J50_0551 A7J50_0551 A7J50_0586 A7J50_0586 A7J50_0759 A7J50_0759 A7J50_0851 A7J50_0851 A7J50_1116 A7J50_1116 A7J50_1147 A7J50_1147 A7J50_1527 A7J50_1527 ccmC ccmC ccmE ccmE A7J50_1913 A7J50_1913 A7J50_1920 A7J50_1920 A7J50_1951 A7J50_1951 A7J50_2025 A7J50_2025 A7J50_2026 A7J50_2026 A7J50_2233 A7J50_2233 A7J50_2421 A7J50_2421 A7J50_2428 A7J50_2428 A7J50_2720 A7J50_2720 A7J50_2750 A7J50_2750 A7J50_2834 A7J50_2834 A7J50_2881 A7J50_2881 A7J50_3377 A7J50_3377 A7J50_3380 A7J50_3380 A7J50_3499 A7J50_3499 A7J50_3558 A7J50_3558 A7J50_3574 A7J50_3574 A7J50_4041 A7J50_4041 A7J50_4251 A7J50_4251 A7J50_4252 A7J50_4252 A7J50_4254 A7J50_4254 A7J50_4255 A7J50_4255 A7J50_4256 A7J50_4256 A7J50_4258 A7J50_4258 A7J50_4305 A7J50_4305 A7J50_4427 A7J50_4427 A7J50_4742 A7J50_4742 A7J50_4783 A7J50_4783 A7J50_4865 A7J50_4865 A7J50_4880 A7J50_4880 A7J50_4883 A7J50_4883 kynA kynA msrQ msrQ A7J50_5062 A7J50_5062 A7J50_5069 A7J50_5069 A7J50_5223 A7J50_5223 A7J50_5224 A7J50_5224 apaG apaG A7J50_5439 A7J50_5439 A7J50_5454 A7J50_5454 A7J50_5648 A7J50_5648 A7J50_5699 A7J50_5699
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A7J50_0054Alcohol dehydrogenase; Pfam:pfam13442 Cytochrome C oxidase, cbb3-type, subunit III. (432 aa)
A7J50_0059Cytochrome B559 subunit alpha; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (348 aa)
A7J50_0060Cytochrome oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (528 aa)
A7J50_0073Hydroperoxidase; Serves to protect cells from the toxic effects of hydrogen peroxide. (713 aa)
A7J50_0084Cytochrome; Pfam:pfam13442 Cytochrome C oxidase, cbb3-type, subunit III. (100 aa)
A7J50_0085Pfam:pfam00034 Cytochrome c. (201 aa)
A7J50_0126Periplasmic protein; Pfam:pfam06035 Bacterial transglutaminase-like cysteine proteinase BTLCP. (207 aa)
A7J50_0551Bacterioferritin; Pfam:pfam00210 Ferritin-like domain. (176 aa)
A7J50_0586precorrin-3B synthase; Pfam:pfam01077 Nitrite and sulphite reductase 4Fe-4S domain. (450 aa)
A7J50_0759Pfam:pfam01370 NAD dependent epimerase/dehydratase family. (299 aa)
A7J50_0851Ubiquinol-cytochrome c reductase; Pfam:pfam02167 Cytochrome C1 family. (259 aa)
A7J50_1116Cytochrome B6; Pfam:pfam03150 Di-heme cytochrome c peroxidase. (329 aa)
A7J50_1147Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (156 aa)
A7J50_1527YceI-like family protein; Pfam:pfam04264 YceI-like domain; Belongs to the UPF0312 family. (193 aa)
ccmCHeme ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. (251 aa)
ccmECytochrome C biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. (155 aa)
A7J50_1913Cytochrome c-type biogenesis protein CcmF; Pfam:pfam01578 Cytochrome C assembly protein. (662 aa)
A7J50_1920Pfam:pfam00067 Cytochrome P450. (373 aa)
A7J50_1951Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (122 aa)
A7J50_2025Catalase; Pfam:pfam00199 Catalase. (387 aa)
A7J50_2026Hypothetical protein. (603 aa)
A7J50_2233Pfam:pfam00034 Cytochrome c. (448 aa)
A7J50_2421Sulfite reductase; Pfam:pfam01077 Nitrite and sulphite reductase 4Fe-4S domain. (552 aa)
A7J50_2428Peptidyl-prolyl cis-trans isomerase; Pfam:pfam06934 Fatty acid cis/trans isomerase (CTI). (764 aa)
A7J50_2720Aldehyde dehydrogenase; Pfam:pfam02738 Molybdopterin-binding domain of aldehyde dehydrogenase. (1174 aa)
A7J50_2750Heme-containing peroxidase/deferrochelatase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (435 aa)
A7J50_2834Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (183 aa)
A7J50_2881Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (212 aa)
A7J50_3377Hypothetical protein. (379 aa)
A7J50_3380Hypothetical protein. (428 aa)
A7J50_3499Peroxidase; Pfam:pfam04261 Dyp-type peroxidase family. (291 aa)
A7J50_3558Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. (360 aa)
A7J50_3574Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (181 aa)
A7J50_4041Pfam:pfam06181 Protein of unknown function (DUF989). (431 aa)
A7J50_4251Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (477 aa)
A7J50_4252Peptidase S41; Pfam:pfam02433 Cytochrome C oxidase, mono-heme subunit/FixO. (202 aa)
A7J50_4254Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (315 aa)
A7J50_4255Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (480 aa)
A7J50_4256Pfam:pfam02433 Cytochrome C oxidase, mono-heme subunit/FixO. (202 aa)
A7J50_4258Cytochrome CBB3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (325 aa)
A7J50_4305Nitrite reductase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (817 aa)
A7J50_4427Pfam:pfam00034 Cytochrome c. (287 aa)
A7J50_4742Thiol oxidoreductase; Pfam:pfam06537 Protein of unknown function (DUF1111). (479 aa)
A7J50_4783Pfam:pfam01578 Cytochrome C assembly protein. (270 aa)
A7J50_4865Cytochrome C. (124 aa)
A7J50_4880Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (672 aa)
A7J50_4883Pfam:pfam00970 Oxidoreductase FAD-binding domain; Belongs to the globin family. (393 aa)
kynATryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. (285 aa)
msrQSulfite oxidase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quin [...] (206 aa)
A7J50_5062Catalase; Pfam:pfam00199 Catalase; Belongs to the catalase family. (513 aa)
A7J50_5069Pfam:pfam01654 Bacterial Cytochrome Ubiquinol Oxidase. (479 aa)
A7J50_5223Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (154 aa)
A7J50_5224Catalase; Pfam:pfam00199 Catalase; Belongs to the catalase family. (482 aa)
apaGMagnesium transporter ApaG; Pfam:pfam04379 Protein of unknown function (DUF525). (126 aa)
A7J50_5439Pfam:pfam01322 Cytochrome C'. (149 aa)
A7J50_5454Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (183 aa)
A7J50_5648Cystathionine gamma-synthase; Pfam:pfam03239 Iron permease FTR1 family. (631 aa)
A7J50_5699Pfam:pfam13442 Cytochrome C oxidase, cbb3-type, subunit III. (142 aa)
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.