STRINGSTRING
A7J50_3574 A7J50_3574 A7J50_3522 A7J50_3522 nuoN nuoN A7J50_0126 A7J50_0126 A7J50_0850 A7J50_0850 A7J50_1953 A7J50_1953 A7J50_2703 A7J50_2703 A7J50_2834 A7J50_2834 A7J50_2881 A7J50_2881 A7J50_3295 A7J50_3295 nuoC nuoC A7J50_3456 A7J50_3456 A7J50_3458 A7J50_3458 nuoK nuoK A7J50_3463 A7J50_3463 A7J50_3464 A7J50_3464 A7J50_5556 A7J50_5556 A7J50_5454 A7J50_5454 A7J50_5069 A7J50_5069 A7J50_5068 A7J50_5068 A7J50_0059 A7J50_0059 A7J50_0060 A7J50_0060 A7J50_0062 A7J50_0062 A7J50_4881 A7J50_4881 A7J50_4880 A7J50_4880 A7J50_4879 A7J50_4879 A7J50_4878 A7J50_4878 A7J50_4861 A7J50_4861 A7J50_4442 A7J50_4442 A7J50_4255 A7J50_4255 A7J50_4251 A7J50_4251 A7J50_3557 A7J50_3557
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A7J50_3574Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (181 aa)
A7J50_3522Monovalent cation/H+ antiporter subunit D; Pfam:pfam00361 NADH-Ubiquinone/plastoquinone (complex I), various chains. (560 aa)
nuoNNADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (487 aa)
A7J50_0126Periplasmic protein; Pfam:pfam06035 Bacterial transglutaminase-like cysteine proteinase BTLCP. (207 aa)
A7J50_0850Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (403 aa)
A7J50_1953Succinate dehydrogenase, iron-sulfur protein; Pfam:pfam13085 2Fe-2S iron-sulfur cluster binding domain. (234 aa)
A7J50_2703D-2-hydroxyacid dehydrogenase; Pfam:pfam02913 FAD linked oxidases, C-terminal domain. (473 aa)
A7J50_2834Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (183 aa)
A7J50_2881Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (212 aa)
A7J50_3295Ferredoxin; Pfam:pfam13510 2Fe-2S iron-sulfur cluster binding domain. (96 aa)
nuoCNADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. (594 aa)
A7J50_3456NADH dehydrogenase subunit E; Pfam:pfam01257 Thioredoxin-like [2Fe-2S] ferredoxin. (165 aa)
A7J50_3458NADH-quinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (904 aa)
nuoKNADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
A7J50_3463NADH:ubiquinone oxidoreductase subunit L; Pfam:pfam00361 NADH-Ubiquinone/plastoquinone (complex I), various chains. (617 aa)
A7J50_3464NADH:ubiquinone oxidoreductase subunit M; Pfam:pfam00361 NADH-Ubiquinone/plastoquinone (complex I), various chains. (510 aa)
A7J50_5556Pfam:pfam02913 FAD linked oxidases, C-terminal domain. (472 aa)
A7J50_5454Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (183 aa)
A7J50_5069Pfam:pfam01654 Bacterial Cytochrome Ubiquinol Oxidase. (479 aa)
A7J50_5068Pfam:pfam02322 Cytochrome oxidase subunit II. (335 aa)
A7J50_0059Cytochrome B559 subunit alpha; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (348 aa)
A7J50_0060Cytochrome oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (528 aa)
A7J50_0062MFS transporter; Pfam:pfam00510 Cytochrome c oxidase subunit III. (295 aa)
A7J50_4881Ubiquinol oxidase subunit II; Pfam:pfam06481 COX Aromatic Rich Motif. (313 aa)
A7J50_4880Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (672 aa)
A7J50_4879Pfam:pfam00510 Cytochrome c oxidase subunit III. (208 aa)
A7J50_4878Pfam:pfam03626 Prokaryotic Cytochrome C oxidase subunit IV. (113 aa)
A7J50_4861Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (181 aa)
A7J50_4442Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (554 aa)
A7J50_4255Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (480 aa)
A7J50_4251Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (477 aa)
A7J50_3557Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (179 aa)
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
Server load: low (18%) [HD]