STRINGSTRING
A7J50_3544 A7J50_3544 A7J50_1837 A7J50_1837 fadA fadA A7J50_2153 A7J50_2153 A7J50_2005 A7J50_2005 A7J50_1932 A7J50_1932 A7J50_1875 A7J50_1875 fadB fadB A7J50_1633 A7J50_1633 A7J50_1506 A7J50_1506 A7J50_2324 A7J50_2324 A7J50_0031 A7J50_0031 A7J50_0032 A7J50_0032 A7J50_0117 A7J50_0117 A7J50_0233 A7J50_0233 A7J50_0271 A7J50_0271 A7J50_0637 A7J50_0637 A7J50_0914 A7J50_0914 A7J50_1030 A7J50_1030 A7J50_1478 A7J50_1478 A7J50_1505 A7J50_1505 A7J50_2582 A7J50_2582 A7J50_2581 A7J50_2581 A7J50_5717 A7J50_5717 A7J50_5555 A7J50_5555 A7J50_5515 A7J50_5515 A7J50_5388 A7J50_5388 A7J50_5340 A7J50_5340 A7J50_5338 A7J50_5338 anmK anmK A7J50_2602 A7J50_2602 A7J50_2657 A7J50_2657 A7J50_2975 A7J50_2975 A7J50_2977 A7J50_2977 A7J50_3102 A7J50_3102 A7J50_3120 A7J50_3120 A7J50_3192 A7J50_3192 A7J50_3330 A7J50_3330 A7J50_3331 A7J50_3331 A7J50_3333 A7J50_3333 A7J50_3576 A7J50_3576 A7J50_3678 A7J50_3678 A7J50_3679 A7J50_3679 A7J50_3685 A7J50_3685 A7J50_3721 A7J50_3721 A7J50_3926 A7J50_3926 A7J50_3931 A7J50_3931 A7J50_3974 A7J50_3974 A7J50_3994 A7J50_3994 A7J50_4221 A7J50_4221 A7J50_4329 A7J50_4329 A7J50_4424 A7J50_4424 A7J50_4425 A7J50_4425 A7J50_4440 A7J50_4440 A7J50_4578 A7J50_4578 A7J50_4599 A7J50_4599 A7J50_4600 A7J50_4600 slyX slyX A7J50_4719 A7J50_4719 edd edd A7J50_5089 A7J50_5089 A7J50_5082 A7J50_5082 A7J50_5025 A7J50_5025 A7J50_4941 A7J50_4941 A7J50_2578 A7J50_2578 A7J50_2491 A7J50_2491 A7J50_2197 A7J50_2197
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A7J50_3544Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (409 aa)
A7J50_1837Putative acyl-CoA thioesterase II; Pfam:pfam13622 Thioesterase-like superfamily. (265 aa)
fadA3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (391 aa)
A7J50_2153Acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
A7J50_2005acyl-CoA dehydrogenase; Pfam:pfam09317 Domain of unknown function (DUF1974). (815 aa)
A7J50_1932Glyoxylate carboligase; Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Belongs to the TPP enzyme family. (591 aa)
A7J50_1875Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family. (263 aa)
fadBFatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
A7J50_1633P-hydroxybenzoate hydroxylase; Pfam:pfam01494 FAD binding domain. (397 aa)
A7J50_1506Protocatechuate 3,4-dioxygenase subunit beta; Pfam:pfam00775 Dioxygenase. (234 aa)
A7J50_2324Pfam:pfam03737 Demethylmenaquinone methyltransferase. (217 aa)
A7J50_00312-dehydro-3-deoxygalactonokinase; Pfam:pfam05035 2-keto-3-deoxy-galactonokinase. (319 aa)
A7J50_0032Pfam:pfam01081 KDPG and KHG aldolase. (206 aa)
A7J50_0117Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain. (393 aa)
A7J50_0233Monooxygenase; Pfam:pfam08028 Acyl-CoA dehydrogenase, C-terminal domain. (413 aa)
A7J50_0271Thioesterase; Pfam:pfam13279 Thioesterase-like superfamily. (143 aa)
A7J50_0637acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)
A7J50_0914Pfam:pfam01553 Acyltransferase. (387 aa)
A7J50_1030Fumarylacetoacetase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. (428 aa)
A7J50_1478Hypothetical protein; Pfam:pfam05721 Phytanoyl-CoA dioxygenase (PhyH). (325 aa)
A7J50_1505acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
A7J50_2582Long-chain fatty acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme. (567 aa)
A7J50_2581acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (432 aa)
A7J50_5717Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (402 aa)
A7J50_5555FAH family protein; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. (221 aa)
A7J50_5515Pfam:pfam12697 Alpha/beta hydrolase family. (332 aa)
A7J50_5388Pfam:pfam00766 Electron transfer flavoprotein FAD-binding domain. (406 aa)
A7J50_5340Pfam:pfam12806 Acetyl-CoA dehydrogenase C-terminal like. (601 aa)
A7J50_5338Pfam:pfam12806 Acetyl-CoA dehydrogenase C-terminal like. (590 aa)
anmKanhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. (363 aa)
A7J50_2602Pfam:pfam08028 Acyl-CoA dehydrogenase, C-terminal domain. (412 aa)
A7J50_2657Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
A7J50_2975Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
A7J50_2977acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
A7J50_3102Acyl-CoA dehydrogenase. (353 aa)
A7J50_3120Acetylglucosaminylphosphatidylinositol deacetylase; Pfam:pfam02585 GlcNAc-PI de-N-acetylase. (252 aa)
A7J50_3192Pfam:pfam06434 Aconitate hydratase 2 N-terminus; Belongs to the aconitase/IPM isomerase family. (874 aa)
A7J50_3330AMP-dependent synthetase; Pfam:pfam00501 AMP-binding enzyme. (511 aa)
A7J50_3331acetyl-CoA acetyltransferase; Pfam:pfam02803 Thiolase, C-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
A7J50_3333methylmalonyl-CoA decarboxylase; Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
A7J50_3576Putative 2,4-dienoyl-CoA reductase; Pfam:pfam00724 NADH:flavin oxidoreductase / NADH oxidase family. (679 aa)
A7J50_36784-hydroxyphenylacetate isomerase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. (221 aa)
A7J50_36792-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. (256 aa)
A7J50_3685Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family. (266 aa)
A7J50_3721GntR family transcriptional regulator; Pfam:pfam04909 Amidohydrolase. (307 aa)
A7J50_3926Pfam:pfam08028 Acyl-CoA dehydrogenase, C-terminal domain. (412 aa)
A7J50_3931Restriction endonuclease subunit S; Pfam:pfam05721 Phytanoyl-CoA dioxygenase (PhyH). (290 aa)
A7J50_3974Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family. (292 aa)
A7J50_3994Acetyl-CoA C-acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
A7J50_42213-oxoacyl-ACP synthase; Pfam:pfam08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal. (373 aa)
A7J50_43293-methylitaconate isomerase; Pfam:pfam04303 PrpF protein. (396 aa)
A7J50_4424Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
A7J50_4425Acetyl-CoA acetyltransferase; Pfam:pfam02803 Thiolase, C-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
A7J50_4440Electron transfer flavoprotein, alpha subunit; Pfam:pfam00766 Electron transfer flavoprotein FAD-binding domain. (309 aa)
A7J50_4578Gluconokinase; Pfam:pfam13671 AAA domain. (177 aa)
A7J50_4599Long-chain fatty acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme. (563 aa)
A7J50_4600Long-chain fatty acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme. (562 aa)
slyXPfam:pfam04102 SlyX; Belongs to the SlyX family. (68 aa)
A7J50_4719Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family. (249 aa)
eddPhosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (608 aa)
A7J50_5089Pfam:pfam13622 Thioesterase-like superfamily. (289 aa)
A7J50_5082Pfam:pfam14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal. (633 aa)
A7J50_50254Fe-4S ferredoxin; Pfam:pfam02913 FAD linked oxidases, C-terminal domain. (936 aa)
A7J50_4941Pfam:pfam00866 Ring hydroxylating beta subunit. (163 aa)
A7J50_2578Acyl-CoA dehydrogenase; Pfam:pfam09317 Domain of unknown function (DUF1974). (841 aa)
A7J50_2491Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. (231 aa)
A7J50_2197Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family. (263 aa)
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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