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| | A7J50_0002 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (367 aa) |
| | glyS | Pfam:pfam02092 Glycyl-tRNA synthetase beta subunit. (684 aa) |
| | glyQ | Pfam:pfam02091 Glycyl-tRNA synthetase alpha subunit. (317 aa) |
| | A7J50_0062 | MFS transporter; Pfam:pfam00510 Cytochrome c oxidase subunit III. (295 aa) |
| | A7J50_0069 | Phage antirepressor; Pfam:pfam02498 BRO family, N-terminal domain. (118 aa) |
| | A7J50_0187 | RNA polymerase sigma factor; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. (190 aa) |
| | A7J50_0231 | Pfam:pfam00296 Luciferase-like monooxygenase. (455 aa) |
| | A7J50_0243 | Pfam:pfam02668 Taurine catabolism dioxygenase TauD, TfdA family. (278 aa) |
| | A7J50_0273 | Pfam:pfam00384 Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (782 aa) |
| | hisH | Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (212 aa) |
| | hslU | ATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (445 aa) |
| | hslV | ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. (192 aa) |
| | A7J50_0403 | Pfam:pfam01645 Conserved region in glutamate synthase. (1481 aa) |
| | A7J50_0404 | Glutamate synthase, NADH/NADPH, small subunit 2; Pfam:pfam14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster. (472 aa) |
| | A7J50_0448 | Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (548 aa) |
| | A7J50_0449 | Pyruvate dehydrogenase; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (881 aa) |
| | A7J50_0474 | Pfam:pfam01266 FAD dependent oxidoreductase. (391 aa) |
| | ureG | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. (204 aa) |
| | ureC | Pfam:pfam00449 Urease alpha-subunit, N-terminal domain. (566 aa) |
| | ureB | Pfam:pfam00699 Urease beta subunit; Belongs to the urease beta subunit family. (101 aa) |
| | A7J50_0585 | precorrin-6Y C5,15-methyltransferase; Pfam:pfam00590 Tetrapyrrole (Corrin/Porphyrin) Methylases. (401 aa) |
| | A7J50_0599 | acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (453 aa) |
| | A7J50_0600 | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (152 aa) |
| | A7J50_0668 | Acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. (150 aa) |
| | A7J50_0703 | Pfam:pfam12307 Protein of unknown function (DUF3631). (504 aa) |
| | A7J50_0704 | Topoisomerase; Pfam:pfam13662 Toprim domain. (306 aa) |
| | A7J50_0711 | RNA polymerase sigma factor; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. (183 aa) |
| | prs | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (310 aa) |
| | cysD | Sulfate adenylyltransferase subunit 2; Pfam:pfam01507 Phosphoadenosine phosphosulfate reductase family. (305 aa) |
| | cysN | Adenylylsulfate kinase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (632 aa) |
| | A7J50_0789 | Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase. (432 aa) |
| | A7J50_0827 | Dipeptide ABC transporter, permease protein DppC; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (303 aa) |
| | A7J50_0850 | Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (403 aa) |
| | A7J50_0853 | Peptidase; Pfam:pfam04386 Stringent starvation protein B. (139 aa) |
| | A7J50_0861 | Pfam:pfam02627 Carboxymuconolactone decarboxylase family. (127 aa) |
| | A7J50_0874 | Protease TldD; Pfam:pfam01523 Putative modulator of DNA gyrase. (480 aa) |
| | A7J50_0876 | Peptidase C69; Pfam:pfam01523 Putative modulator of DNA gyrase. (448 aa) |
| | A7J50_0886 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (497 aa) |
| | A7J50_0967 | 2-ketogluconate reductase; Pfam:pfam00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain. (324 aa) |
| | A7J50_0998 | Molybdopterin converting factor subunit 1; Pfam:pfam02597 ThiS family. (80 aa) |
| | A7J50_0999 | Molybdenum cofactor biosynthesis protein MoaE; Pfam:pfam02391 MoaE protein. (149 aa) |
| | A7J50_1061 | Pfam:pfam04364 DNA polymerase III chi subunit, HolC. (142 aa) |
| | A7J50_1144 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (307 aa) |
| | A7J50_1161 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa) |
| | mutS | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (859 aa) |
| | A7J50_1173 | Pfam:pfam00196 Bacterial regulatory proteins, luxR family. (126 aa) |
| | A7J50_1211 | Hydrolase Nlp/P60; Pfam:pfam14464 Prokaryotic JAB domain. (260 aa) |
| | A7J50_1259 | Hypothetical protein. (356 aa) |
| | A7J50_1325 | Exodeoxyribonuclease X. (223 aa) |
| | A7J50_1384 | Hydrolase Nlp/P60; Pfam:pfam14464 Prokaryotic JAB domain. (254 aa) |
| | A7J50_1422 | Pfam:pfam07733 Bacterial DNA polymerase III alpha subunit. (1173 aa) |
| | accA | acetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (315 aa) |
| | eno | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (429 aa) |
| | rpoS | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. (336 aa) |
| | A7J50_1462 | Beta-agarase. (765 aa) |
| | A7J50_1469 | Cysteine synthase; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme. (364 aa) |
| | A7J50_1511 | Pfam:pfam02627 Carboxymuconolactone decarboxylase family. (132 aa) |
| | A7J50_1533 | Pfam:pfam13679 Methyltransferase domain. (405 aa) |
| | A7J50_1570 | Urea carboxylase; Pfam:pfam02626 Allophanate hydrolase subunit 2. (1230 aa) |
| | A7J50_1592 | RNA polymerase sigma-H factor; Pfam:pfam08281 Sigma-70, region 4; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa) |
| | A7J50_1597 | Response regulator SirA; Pfam:pfam01206 Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family. (79 aa) |
| | A7J50_1626 | Hypothetical protein; Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Belongs to the TPP enzyme family. (541 aa) |
| | A7J50_1654 | Pfam:pfam13230 Glutamine amidotransferases class-II. (258 aa) |
| | A7J50_1664 | Cysteine synthase; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme; Belongs to the cysteine synthase/cystathionine beta- synthase family. (324 aa) |
| | tusA | Sulfurtransferase; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family. (83 aa) |
| | A7J50_1705 | Phosphatase/phosphohexomutase-like protein; Pfam:pfam13419 Haloacid dehalogenase-like hydrolase. (202 aa) |
| | A7J50_1717 | Toprim domain protein; Pfam:pfam13155 Toprim-like. (937 aa) |
| | A7J50_1791 | Nickel ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (285 aa) |
| | A7J50_1890 | Deoxyguanosinetriphosphate triphosphohydrolase. (443 aa) |
| | A7J50_1928 | Pfam:pfam00224 Pyruvate kinase, barrel domain; Belongs to the pyruvate kinase family. (471 aa) |
| | A7J50_1932 | Glyoxylate carboligase; Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Belongs to the TPP enzyme family. (591 aa) |
| | A7J50_1950 | Pfam:pfam01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit. (124 aa) |
| | A7J50_1952 | Succinate dehydrogenase; Pfam:pfam00890 FAD binding domain; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (590 aa) |
| | A7J50_1954 | 2-oxoglutarate dehydrogenase E1; Pfam:pfam02779 Transketolase, pyrimidine binding domain. (943 aa) |
| | A7J50_1955 | Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (408 aa) |
| | sucC | Succinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (404 aa) |
| | sucD | Succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (293 aa) |
| | gpsA | Pfam:pfam01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (341 aa) |
| | A7J50_2000 | Pfam:pfam13302 Acetyltransferase (GNAT) domain. (184 aa) |
| | leuC | Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (472 aa) |
| | leuD | 3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (204 aa) |
| | ssuD | Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. (380 aa) |
| | A7J50_2064 | FMN reductase; Pfam:pfam03358 NADPH-dependent FMN reductase. (187 aa) |
| | A7J50_2066 | Cysteine desulfurase; Pfam:pfam00266 Aminotransferase class-V. (386 aa) |
| | A7J50_2079 | Pfam:pfam00136 DNA polymerase family B. (785 aa) |
| | A7J50_2200 | Decarboxylase; Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Belongs to the TPP enzyme family. (535 aa) |
| | uvrC | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (607 aa) |
| | A7J50_2262 | Monooxygenase; Pfam:pfam00296 Luciferase-like monooxygenase. (443 aa) |
| | A7J50_2278 | Monooxygenase; Pfam:pfam00296 Luciferase-like monooxygenase. (451 aa) |
| | A7J50_2284 | Putative alkanesulfonate monooxygenase; Pfam:pfam00296 Luciferase-like monooxygenase. (360 aa) |
| | dnaE2 | DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. (1023 aa) |
| | A7J50_2355 | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (839 aa) |
| | dnaQ | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (248 aa) |
| | A7J50_2417 | Pyruvate dehydrogenase; Pfam:pfam02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Belongs to the TPP enzyme family. (574 aa) |
| | A7J50_2435 | Cobaltochelatase subunit CobN; Pfam:pfam02514 CobN/Magnesium Chelatase. (1253 aa) |
| | A7J50_2442 | LuxR family transcriptional regulator. (225 aa) |
| | A7J50_2470 | Putative thiamine pyrophosphate-dependent protein; Pfam:pfam02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Belongs to the TPP enzyme family. (643 aa) |
| | A7J50_2498 | RNA polymerase sigma factor; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. (192 aa) |
| | A7J50_2583 | Bifunctional glyoxylate/hydroxypyruvate reductase B; Pfam:pfam00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain. (325 aa) |
| | A7J50_2597 | RNA polymerase subunit sigma-70; Pfam:pfam10099 Anti-sigma-K factor rskA. (224 aa) |
| | A7J50_2598 | RNA polymerase sigma factor; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. (199 aa) |
| | A7J50_2603 | Pfam:pfam00296 Luciferase-like monooxygenase. (361 aa) |
| | A7J50_2663 | Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (416 aa) |
| | A7J50_2670 | Peptide ABC transporter; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (278 aa) |
| | A7J50_2723 | Hypothetical protein; Pfam:pfam13521 AAA domain. (181 aa) |
| | ku | Non-homologous end joining protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (291 aa) |
| | A7J50_2749 | Putative lipoprotein; Pfam:pfam09375 Imelysin. (272 aa) |
| | A7J50_2751 | Multidrug DMT transporter permease; Pfam:pfam09375 Imelysin. (400 aa) |
| | A7J50_2752 | Pfam:pfam03239 Iron permease FTR1 family. (281 aa) |
| | A7J50_3019 | Alkyl hydroperoxide reductase subunit; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase. (521 aa) |
| | A7J50_3021 | Cointegrase; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family. (310 aa) |
| | A7J50_3100 | ABC transporter substrate-binding protein; Pfam:pfam13379 NMT1-like family. (399 aa) |
| | A7J50_3114 | Malto-oligosyltrehalose trehalohydrolase; Pfam:pfam11941 Domain of unknown function (DUF3459). (581 aa) |
| | A7J50_3129 | Cystathionine beta-synthase; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme. (458 aa) |
| | A7J50_3199 | Pfam:pfam00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain. (316 aa) |
| | A7J50_3229 | Pfam:pfam13302 Acetyltransferase (GNAT) domain. (183 aa) |
| | A7J50_3256 | DNA-binding protein; Pfam:pfam08279 HTH domain. (238 aa) |
| | A7J50_3282 | FmdB family transcriptional regulator; Pfam:pfam09723 Zinc ribbon domain. (115 aa) |
| | A7J50_3382 | Hypothetical protein. (349 aa) |
| | A7J50_3397 | LuxR family transcriptional regulator. (71 aa) |
| | A7J50_3409 | Pfam:pfam09835 Uncharacterized protein conserved in bacteria (DUF2062). (173 aa) |
| | A7J50_3413 | Pfam:pfam00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain. (329 aa) |
| | A7J50_3425 | Sulfur transfer complex subunit TusD; Pfam:pfam02635 DsrE/DsrF-like family. (130 aa) |
| | A7J50_3426 | Sulfur relay protein TusC; Pfam:pfam02635 DsrE/DsrF-like family; Belongs to the DsrF/TusC family. (116 aa) |
| | A7J50_3427 | Pfam:pfam04077 DsrH like protein. (92 aa) |
| | nuoA | NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (137 aa) |
| | nuoB | NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (224 aa) |
| | nuoC | NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. (594 aa) |
| | A7J50_3456 | NADH dehydrogenase subunit E; Pfam:pfam01257 Thioredoxin-like [2Fe-2S] ferredoxin. (165 aa) |
| | A7J50_3457 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (451 aa) |
| | A7J50_3458 | NADH-quinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (904 aa) |
| | nuoH | NADH:ubiquinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (335 aa) |
| | nuoI | NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (182 aa) |
| | A7J50_3461 | NADH-quinone oxidoreductase, J subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (167 aa) |
| | nuoK | NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa) |
| | A7J50_3463 | NADH:ubiquinone oxidoreductase subunit L; Pfam:pfam00361 NADH-Ubiquinone/plastoquinone (complex I), various chains. (617 aa) |
| | A7J50_3464 | NADH:ubiquinone oxidoreductase subunit M; Pfam:pfam00361 NADH-Ubiquinone/plastoquinone (complex I), various chains. (510 aa) |
| | A7J50_3515 | N5,N10-methylene tetrahydromethanopterin reductase; Pfam:pfam00296 Luciferase-like monooxygenase. (459 aa) |
| | A7J50_3522 | Monovalent cation/H+ antiporter subunit D; Pfam:pfam00361 NADH-Ubiquinone/plastoquinone (complex I), various chains. (560 aa) |
| | A7J50_3551 | methylcrotonoyl-CoA carboxylase; Pfam:pfam01039 Carboxyl transferase domain. (535 aa) |
| | A7J50_3553 | 3-methylcrotonyl-CoA carboxylase subunit alpha; Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain. (641 aa) |
| | A7J50_3559 | Putative RNA polymerase sigma factor; Pfam:pfam08281 Sigma-70, region 4; Belongs to the sigma-70 factor family. ECF subfamily. (168 aa) |
| | phnX | Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family. (275 aa) |
| | clpX | ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (427 aa) |
| | A7J50_3598 | Pfam:pfam14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster. (455 aa) |
| | A7J50_3599 | Dihydropyrimidine dehydrogenase; Pfam:pfam14697 4Fe-4S dicluster domain. (424 aa) |
| | A7J50_3620 | 2-oxoisovalerate dehydrogenase subunit beta; Pfam:pfam02780 Transketolase, C-terminal domain. (352 aa) |
| | A7J50_3621 | Branched-chain alpha-keto acid dehydrogenase subunit E2; Pfam:pfam00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain). (419 aa) |
| | A7J50_3650 | Malate dehydrogenase. (346 aa) |
| | A7J50_3660 | Gluconolactonase; Pfam:pfam03088 Strictosidine synthase. (366 aa) |
| | A7J50_3675 | Pfam:pfam00196 Bacterial regulatory proteins, luxR family. (264 aa) |
| | A7J50_3709 | Hypothetical protein; Pfam:pfam08874 Domain of unknown function (DUF1835). (401 aa) |
| | A7J50_3744 | Transposase; Pfam:pfam13333 Integrase core domain. (76 aa) |
| | pheT | phenylalanyl-tRNA synthetase; Pfam:pfam03483 B3/4 domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. (792 aa) |
| | pheS | Phenylalanine--tRNA ligase alpha subunit; Pfam:pfam01409 tRNA synthetases class II core domain (F); Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (338 aa) |
| | A7J50_3848 | Glycerol-3-phosphatase; Pfam:pfam00702 haloacid dehalogenase-like hydrolase. (225 aa) |
| | accD | acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (306 aa) |
| | leuD-2 | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (214 aa) |
| | leuC-2 | Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (472 aa) |
| | uvrB | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (671 aa) |
| | A7J50_3977 | Pfam:pfam03022 Major royal jelly protein. (368 aa) |
| | A7J50_4072 | methylcrotonoyl-CoA carboxylase; Pfam:pfam01039 Carboxyl transferase domain. (538 aa) |
| | A7J50_4075 | 3-methylcrotonyl-CoA carboxylase subunit alpha; Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain. (640 aa) |
| | fliA | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (246 aa) |
| | cobQ | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (483 aa) |
| | A7J50_4189 | Cysteine synthase; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme; Belongs to the cysteine synthase/cystathionine beta- synthase family. (300 aa) |
| | A7J50_4196 | FAD dependent oxidoreductase. (693 aa) |
| | A7J50_4219 | Transmembrane anti-sigma factor; Pfam:pfam13490 Putative zinc-finger. (77 aa) |
| | A7J50_4229 | Pfam:pfam01507 Phosphoadenosine phosphosulfate reductase family. (480 aa) |
| | cysC | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (628 aa) |
| | A7J50_4250 | Pfam:pfam12695 Alpha/beta hydrolase family. (230 aa) |
| | dnaX | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (690 aa) |
| | A7J50_4301 | Nitrate transporter; Pfam:pfam13379 NMT1-like family. (408 aa) |
| | A7J50_4307 | Nitrate reductase subunit alpha; Pfam:pfam00384 Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (902 aa) |
| | A7J50_4310 | RNA polymerase sigma factor SigX; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. (196 aa) |
| | A7J50_4321 | Cysteine synthase; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme. (304 aa) |
| | A7J50_4371 | Antirepressor protein; Pfam:pfam10547 P22_AR N-terminal domain. (283 aa) |
| | A7J50_4411 | Hypothetical protein; Pfam:pfam13155 Toprim-like. (907 aa) |
| | A7J50_4464 | Pfam:pfam13177 DNA polymerase III, delta subunit. (329 aa) |
| | A7J50_4491 | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (964 aa) |
| | ribH | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. (169 aa) |
| | A7J50_4533 | Phage antirepressor protein; Pfam:pfam02498 BRO family, N-terminal domain. (203 aa) |
| | A7J50_4569 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. (403 aa) |
| | A7J50_4594 | Pfam:pfam13489 Methyltransferase domain. (272 aa) |
| | A7J50_4654 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (336 aa) |
| | gcvH | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (127 aa) |
| | gcvP | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (946 aa) |
| | A7J50_4661 | Pfam:pfam01571 Aminomethyltransferase folate-binding domain. (374 aa) |
| | ruvB | Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (352 aa) |
| | ruvA | Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (203 aa) |
| | ruvC | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (174 aa) |
| | A7J50_4688 | FmdB family transcriptional regulator; Pfam:pfam09723 Zinc ribbon domain. (73 aa) |
| | A7J50_4718 | Pfam:pfam00224 Pyruvate kinase, barrel domain; Belongs to the pyruvate kinase family. (483 aa) |
| | dinB | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (352 aa) |
| | xerD | Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (298 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (489 aa) |
| | xseA | Exodeoxyribonuclease; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (459 aa) |
| | hscB | Co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. (173 aa) |
| | A7J50_4834 | Iron-binding protein IscA; Is able to transfer iron-sulfur clusters to apo-ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system; Belongs to the HesB/IscA family. (107 aa) |
| | A7J50_4835 | FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. (128 aa) |
| | iscS | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. (404 aa) |
| | A7J50_4878 | Pfam:pfam03626 Prokaryotic Cytochrome C oxidase subunit IV. (113 aa) |
| | A7J50_4879 | Pfam:pfam00510 Cytochrome c oxidase subunit III. (208 aa) |
| | A7J50_4906 | Thioredoxin reductase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase. (320 aa) |
| | A7J50_4940 | Benzoate 1,2-dioxygenase subunit alpha; Pfam:pfam00355 Rieske [2Fe-2S] domain. (463 aa) |
| | A7J50_4941 | Pfam:pfam00866 Ring hydroxylating beta subunit. (163 aa) |
| | kynA | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. (285 aa) |
| | kynB | Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. (216 aa) |
| | recD | Exodeoxyribonuclease V subunit alpha; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] (689 aa) |
| | recB | Exodeoxyribonuclease V subunit beta; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and rep [...] (1224 aa) |
| | recC | Exodeoxyribonuclease V subunit gamma; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] (1150 aa) |
| | A7J50_4967 | Pfam:pfam10369 Small subunit of acetolactate synthase. (163 aa) |
| | A7J50_4968 | Acetolactate synthase; Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain. (574 aa) |
| | A7J50_4987 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Pfam:pfam01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). (161 aa) |
| | carB | Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain; Belongs to the CarB family. (1073 aa) |
| | A7J50_5028 | Restriction endonuclease subunit R; Pfam:pfam08463 EcoEI R protein C-terminal. (1158 aa) |
| | A7J50_5029 | Hypothetical protein. (69 aa) |
| | A7J50_5030 | Hypothetical protein; Pfam:pfam01420 Type I restriction modification DNA specificity domain. (388 aa) |
| | A7J50_5031 | Pfam:pfam02384 N-6 DNA Methylase. (494 aa) |
| | A7J50_5032 | Pfam:pfam13148 Protein of unknown function (DUF3987). (466 aa) |
| | A7J50_5051 | Pfam:pfam00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (445 aa) |
| | A7J50_5099 | DNA polymerase III subunit epsilon; Pfam:pfam00929 Exonuclease. (203 aa) |
| | A7J50_5100 | Nuclease; Pfam:pfam01936 NYN domain. (158 aa) |
| | A7J50_5128 | Pfam:pfam06144 DNA polymerase III, delta subunit. (345 aa) |
| | eutC | Pfam:pfam05985 Ethanolamine ammonia-lyase light chain (EutC); Belongs to the EutC family. (273 aa) |
| | xseB | Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (80 aa) |
| | ribH-2 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. (158 aa) |
| | uvrA | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (944 aa) |
| | rpoA | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (333 aa) |
| | rpoC | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1399 aa) |
| | rpoB | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1357 aa) |
| | A7J50_5311 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Pfam:pfam01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). (172 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (656 aa) |
| | rpoD | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (616 aa) |
| | A7J50_5320 | Hypothetical protein; Pfam:pfam14090 Helix-turn-helix domain. (94 aa) |
| | A7J50_5371 | RNA polymerase subunit sigma-70; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. (208 aa) |
| | A7J50_5372 | Pfam:pfam10099 Anti-sigma-K factor rskA. (225 aa) |
| | A7J50_5385 | Ferredoxin; Pfam:pfam00970 Oxidoreductase FAD-binding domain. (366 aa) |
| | A7J50_5413 | Peptidase C69; Pfam:pfam01523 Putative modulator of DNA gyrase. (480 aa) |
| | A7J50_5414 | Zn-dependent protease; Pfam:pfam01523 Putative modulator of DNA gyrase. (438 aa) |
| | A7J50_5469 | Pfam:pfam06833 Malonate decarboxylase gamma subunit (MdcE). (256 aa) |
| | A7J50_5470 | Malonate decarboxylase subunit beta; Pfam:pfam01039 Carboxyl transferase domain. (280 aa) |
| | pyrB | Pfam:pfam02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (334 aa) |
| | A7J50_5491 | Membrane protein; Pfam:pfam05154 TM2 domain. (142 aa) |
| | trmB | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (241 aa) |
| | thiG | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. (264 aa) |
| | A7J50_5505 | Sulfur carrier protein ThiS; Pfam:pfam02597 ThiS family. (66 aa) |
| | rpoH | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. (284 aa) |
| | A7J50_5513 | Pfam:pfam05193 Peptidase M16 inactive domain. (496 aa) |
| | A7J50_5522 | Ferredoxin. (83 aa) |
| | A7J50_5572 | Carboxymuconolactone decarboxylase family protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (117 aa) |
| | ssuD-2 | Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. (382 aa) |
| | A7J50_5590 | Pfam:pfam03358 NADPH-dependent FMN reductase. (197 aa) |
| | gcvH-2 | Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (127 aa) |
| | gcvT | Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. (360 aa) |
| | ppk | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (740 aa) |
| | A7J50_5648 | Cystathionine gamma-synthase; Pfam:pfam03239 Iron permease FTR1 family. (631 aa) |
| | A7J50_5685 | Pfam:pfam01078 Magnesium chelatase, subunit ChlI. (498 aa) |
| | A7J50_5716 | DNA repair protein RadC; Pfam:pfam04002 RadC-like JAB domain; Belongs to the UPF0758 family. (224 aa) |
| | A7J50_5717 | Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (402 aa) |
| | rph | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (240 aa) |
| | rpoZ | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (87 aa) |
| | A7J50_5737 | Pfam:pfam03239 Iron permease FTR1 family. (275 aa) |
| | A7J50_5738 | Sugar ABC transporter substrate-binding protein; Pfam:pfam10634 Fe2+ transport protein. (176 aa) |
| | recG | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (691 aa) |
| | A7J50_5764 | Hypothetical protein; Pfam:pfam08786 Domain of unknown function (DUF1795). (144 aa) |
| | A7J50_5805 | Pfam:pfam02436 Conserved carboxylase domain. (602 aa) |
| | A7J50_5806 | Biotin carboxylase; Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain. (471 aa) |
| | A7J50_5811 | Pfam:pfam13361 UvrD-like helicase C-terminal domain. (727 aa) |
