STRINGSTRING
A7J50_4718 A7J50_4718 A7J50_3685 A7J50_3685 A7J50_4316 A7J50_4316 prpB prpB A7J50_3452 A7J50_3452 A7J50_4796 A7J50_4796 A7J50_4805 A7J50_4805 panB panB A7J50_5545 A7J50_5545 A7J50_1290 A7J50_1290 A7J50_1928 A7J50_1928 A7J50_2653 A7J50_2653 A7J50_0808 A7J50_0808 A7J50_2850 A7J50_2850
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A7J50_4718Pfam:pfam00224 Pyruvate kinase, barrel domain; Belongs to the pyruvate kinase family. (483 aa)
A7J50_3685Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family. (266 aa)
A7J50_4316Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (791 aa)
prpBMethylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (297 aa)
A7J50_3452Pfam:pfam00463 Isocitrate lyase family. (441 aa)
A7J50_4796N-acetyl-D-glucosamine phosphotransferase system transporter; Pfam:pfam02896 PEP-utilizing enzyme, TIM barrel domain. (836 aa)
A7J50_4805PTS mannose transporter subunit IIC; Pfam:pfam02896 PEP-utilizing enzyme, TIM barrel domain. (846 aa)
panB3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. (266 aa)
A7J50_5545Phosphoenolpyruvate-protein phosphotransferase; Pfam:pfam02896 PEP-utilizing enzyme, TIM barrel domain; Belongs to the PEP-utilizing enzyme family. (759 aa)
A7J50_12902-methylisocitrate lyase; Pfam:pfam13714 Phosphoenolpyruvate phosphomutase. (275 aa)
A7J50_1928Pfam:pfam00224 Pyruvate kinase, barrel domain; Belongs to the pyruvate kinase family. (471 aa)
A7J50_2653PEP phosphonomutase-like enzyme; Pfam:pfam13714 Phosphoenolpyruvate phosphomutase. (266 aa)
A7J50_0808PTS fructose transporter subunit IIA; Pfam:pfam02896 PEP-utilizing enzyme, TIM barrel domain; Belongs to the PEP-utilizing enzyme family. (952 aa)
A7J50_2850Oxaloacetate decarboxylase; Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate; Belongs to the isocitrate lyase family. Oxaloacetate decarboxylase subfamily. (289 aa)
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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