STRINGSTRING
A7J50_2569 A7J50_2569 A7J50_4797 A7J50_4797 A7J50_4808 A7J50_4808 A7J50_0810 A7J50_0810
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A7J50_2569Putative EAL domain-containing signaling protein; Pfam:pfam00563 EAL domain. (690 aa)
A7J50_4797Pfam:pfam02378 Phosphotransferase system, EIIC. (568 aa)
A7J50_4808Trehalose permease IIC protein; Pfam:pfam02378 Phosphotransferase system, EIIC. (480 aa)
A7J50_0810PTS fructose transporter subunit IIBC; Pfam:pfam02302 PTS system, Lactose/Cellobiose specific IIB subunit. (572 aa)
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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