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trpB trpB A7J50_4331 A7J50_4331 A7J50_4158 A7J50_4158 A7J50_3023 A7J50_3023 A7J50_2326 A7J50_2326 A7J50_1949 A7J50_1949 A7J50_1928 A7J50_1928 A7J50_1882 A7J50_1882 A7J50_1431 A7J50_1431 ppc ppc A7J50_0880 A7J50_0880 trpS trpS speA speA aroK aroK trpA trpA A7J50_5363 A7J50_5363 glcB glcB A7J50_4910 A7J50_4910 A7J50_4718 A7J50_4718 A7J50_4622 A7J50_4622
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
trpBTryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (408 aa)
A7J50_4331Pfam:pfam00285 Citrate synthase; Belongs to the citrate synthase family. (375 aa)
A7J50_4158Pfam:pfam00255 Glutathione peroxidase; Belongs to the glutathione peroxidase family. (182 aa)
A7J50_3023Glutathione reductase; Maintains high levels of reduced glutathione. (452 aa)
A7J50_2326Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (895 aa)
A7J50_1949Pfam:pfam00285 Citrate synthase; Belongs to the citrate synthase family. (429 aa)
A7J50_1928Pfam:pfam00224 Pyruvate kinase, barrel domain; Belongs to the pyruvate kinase family. (471 aa)
A7J50_1882Pfam:pfam00255 Glutathione peroxidase; Belongs to the glutathione peroxidase family. (161 aa)
A7J50_1431Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain. (370 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (881 aa)
A7J50_0880Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (203 aa)
trpSTryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (455 aa)
speAArginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. (637 aa)
aroKShikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (163 aa)
trpATryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (269 aa)
A7J50_5363S-transferase; Pfam:pfam13417 Glutathione S-transferase, N-terminal domain. (209 aa)
glcBMalate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (725 aa)
A7J50_4910Pfam:pfam00255 Glutathione peroxidase; Belongs to the glutathione peroxidase family. (160 aa)
A7J50_4718Pfam:pfam00224 Pyruvate kinase, barrel domain; Belongs to the pyruvate kinase family. (483 aa)
A7J50_4622Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (198 aa)
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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