STRINGSTRING
A7J50_0133 A7J50_0133 A7J50_0243 A7J50_0243 A7J50_0693 A7J50_0693 A7J50_0768 A7J50_0768 A7J50_2722 A7J50_2722 A7J50_2754 A7J50_2754 ackA ackA A7J50_3208 A7J50_3208 A7J50_3466 A7J50_3466
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A7J50_0133Pfam:pfam02668 Taurine catabolism dioxygenase TauD, TfdA family. (297 aa)
A7J50_0243Pfam:pfam02668 Taurine catabolism dioxygenase TauD, TfdA family. (278 aa)
A7J50_0693Gamma-glutamyltransferase; Pfam:pfam01019 Gamma-glutamyltranspeptidase. (603 aa)
A7J50_0768Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (699 aa)
A7J50_2722Pfam:pfam01019 Gamma-glutamyltranspeptidase. (574 aa)
A7J50_2754Glutamate decarboxylase; Pfam:pfam00282 Pyridoxal-dependent decarboxylase conserved domain; Belongs to the group II decarboxylase family. (476 aa)
ackAPropionate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (404 aa)
A7J50_3208Pfam:pfam05088 Bacterial NAD-glutamate dehydrogenase. (1622 aa)
A7J50_3466Gamma-glutamyltransferase; Pfam:pfam01019 Gamma-glutamyltranspeptidase. (531 aa)
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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