STRINGSTRING
A7J50_0112 A7J50_0112 A7J50_0190 A7J50_0190 A7J50_0191 A7J50_0191 A7J50_0384 A7J50_0384 A7J50_0386 A7J50_0386 A7J50_0637 A7J50_0637 A7J50_1126 A7J50_1126 A7J50_1503 A7J50_1503 A7J50_1504 A7J50_1504 A7J50_1546 A7J50_1546 A7J50_1626 A7J50_1626 fadB fadB fabV fabV A7J50_1875 A7J50_1875 A7J50_1950 A7J50_1950 A7J50_1951 A7J50_1951 A7J50_1952 A7J50_1952 A7J50_1953 A7J50_1953 A7J50_2153 A7J50_2153 A7J50_2154 A7J50_2154 A7J50_2155 A7J50_2155 A7J50_2390 A7J50_2390 A7J50_2391 A7J50_2391 A7J50_2581 A7J50_2581 A7J50_2657 A7J50_2657 A7J50_2666 A7J50_2666 maiA maiA A7J50_2754 A7J50_2754 A7J50_2940 A7J50_2940 A7J50_2975 A7J50_2975 A7J50_2976 A7J50_2976 A7J50_2977 A7J50_2977 A7J50_3331 A7J50_3331 A7J50_3547 A7J50_3547 A7J50_3690 A7J50_3690 A7J50_3890 A7J50_3890 A7J50_3974 A7J50_3974 A7J50_4420 A7J50_4420 A7J50_4424 A7J50_4424 A7J50_4425 A7J50_4425 A7J50_4602 A7J50_4602 A7J50_4872 A7J50_4872 A7J50_4967 A7J50_4967 A7J50_4968 A7J50_4968
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A7J50_0112Pfam:pfam13336 Acetyl-CoA hydrolase/transferase C-terminal domain. (497 aa)
A7J50_0190Succinate-semialdehyde dehdyrogenase; Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. (480 aa)
A7J50_0191Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (425 aa)
A7J50_0384Pfam:pfam07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus. (560 aa)
A7J50_0386Pfam:pfam07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus. (559 aa)
A7J50_0637acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)
A7J50_1126Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (464 aa)
A7J50_1503Pfam:pfam01144 Coenzyme A transferase. (285 aa)
A7J50_15043-oxoadipate:succinyl-CoA transferase subunit B; Pfam:pfam01144 Coenzyme A transferase. (259 aa)
A7J50_1546hydroxymethylglutaryl-CoA lyase; Pfam:pfam00682 HMGL-like. (313 aa)
A7J50_1626Hypothetical protein; Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Belongs to the TPP enzyme family. (541 aa)
fadBFatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
fabVtrans-2-enoyl-CoA reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. (397 aa)
A7J50_1875Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family. (263 aa)
A7J50_1950Pfam:pfam01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit. (124 aa)
A7J50_1951Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (122 aa)
A7J50_1952Succinate dehydrogenase; Pfam:pfam00890 FAD binding domain; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (590 aa)
A7J50_1953Succinate dehydrogenase, iron-sulfur protein; Pfam:pfam13085 2Fe-2S iron-sulfur cluster binding domain. (234 aa)
A7J50_2153Acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
A7J50_21543-oxoacid CoA-transferase subunit B; Pfam:pfam01144 Coenzyme A transferase. (219 aa)
A7J50_2155Pfam:pfam01144 Coenzyme A transferase. (232 aa)
A7J50_2390Putative acetoacetyl-coenzyme A synthetase; Pfam:pfam00501 AMP-binding enzyme. (652 aa)
A7J50_2391Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (257 aa)
A7J50_2581acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (432 aa)
A7J50_2657Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
A7J50_2666Succinate-semialdehyde dehdyrogenase; Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. (477 aa)
maiAAsp/Glu racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. (250 aa)
A7J50_2754Glutamate decarboxylase; Pfam:pfam00282 Pyridoxal-dependent decarboxylase conserved domain; Belongs to the group II decarboxylase family. (476 aa)
A7J50_2940Succinate-semialdehyde dehdyrogenase; Pfam:pfam00171 Aldehyde dehydrogenase family. (476 aa)
A7J50_2975Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
A7J50_2976Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (375 aa)
A7J50_2977acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
A7J50_3331acetyl-CoA acetyltransferase; Pfam:pfam02803 Thiolase, C-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
A7J50_3547hydroxymethylglutaryl-CoA lyase; Pfam:pfam00682 HMGL-like. (299 aa)
A7J50_36903-oxoacyl-ACP reductase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase. (267 aa)
A7J50_3890Pfam:pfam00171 Aldehyde dehydrogenase family. (463 aa)
A7J50_3974Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family. (292 aa)
A7J50_4420Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family. (230 aa)
A7J50_4424Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
A7J50_4425Acetyl-CoA acetyltransferase; Pfam:pfam02803 Thiolase, C-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
A7J50_46023-hydroxybutyryl-CoA dehydratase; Pfam:pfam01575 MaoC like domain. (156 aa)
A7J50_4872Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (416 aa)
A7J50_4967Pfam:pfam10369 Small subunit of acetolactate synthase. (163 aa)
A7J50_4968Acetolactate synthase; Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain. (574 aa)
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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