STRINGSTRING
STY1205 STY1205 STY1453 STY1453 STY2543 STY2543 STY2682 STY2682 STY2683 STY2683 STY2685 STY2685 STY2686 STY2686 STY2689 STY2689 STY2723 STY2723 STY2843 STY2843 STY2844 STY2844 STY3044 STY3044 STY3455 STY3455 STY3849 STY3849 STY3988 STY3988 STY4159 STY4159 STY4265 STY4265 glpG glpG glpR glpR yjaB yjaB STY4486 STY4486 STY4812 STY4812 rimI rimI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STY1205Ribosomal-protein-alanine acetyltransferase; Orthologue of E. coli rimJ (RIMJ_ECOLI); Fasta hit to RIMJ_ECOLI (194 aa), 95% identity in 194 aa overlap. (194 aa)
STY1453Ribosomal-protein-serine acetyltransferase; Orthologue of E. coli rimL (RIML_ECOLI); Fasta hit to RIML_ECOLI (179 aa), 69% identity in 178 aa overlap. (179 aa)
STY2543Conserved hypothetical protein; Orthologue of E. coli ELAA_ECOLI; Fasta hit to ELAA_ECOLI (153 aa), 80% identity in 153 aa overlap. (153 aa)
STY2682Putative oxidoreductase; Similar to many e.g. Rhizobium meliloti D-beta-hydroxybutyrate dehydrogenase bdhA SW:BDHA_RHIME (O86034) (258 aa) fasta scores: E(): 6.7e-25, 38.0% id in 255 aa; Fasta hit to FABG_ECOLI (244 aa), 37% identity in 248 aa overlap; Fasta hit to YCIK_ECOLI (252 aa), 34% identity in 227 aa overlap; Fasta hit to YJGI_ECOLI (237 aa), 35% identity in 254 aa overlap; Fasta hit to YOHF_ECOLI (253 aa), 32% identity in 254 aa overlap; Fasta hit to YGCW_ECOLI (261 aa), 33% identity in 249 aa overlap; Fasta hit to YGFF_ECOLI (247 aa), 31% identity in 257 aa overlap; Fasta hit [...] (263 aa)
STY2683Similar to hypothetical proteins e.g. Neisseria meningitidis serogroup A hypothetical protein NMA0996 TR:Q9JV47 (EMBL:AL162754) (302 aa) fasta scores: E(): 0, 50.3% id in 302 aa, Neisseria meningitidis serogroup B hypothetical protein NMB0786 TR:Q9K036 (EMBL:AE002432) (302 aa) fasta scores: E(): 0, 50.3% id in 302 aa and Vibrio cholerae TyrA protein VC2145 TR:Q9KQ59 (EMBL:AE004287) (302 aa) fasta scores: E(): 0, 45.6% id in 294 aa; Orthologue of E. coli P76536; Fasta hit to P76536 (308 aa), 94% identity in 299 aa overlap. (299 aa)
STY2685Conserved hypothetical protein; Shows weak similarity to Vibrio cholerae hypothetical protein VC2146 TR:Q9KQ58 (EMBL:AE004287) (154 aa) fasta scores: E(): 3.4e-08, 35.0% id in 123 aa; Orthologue of E. coli YFEZ_ECOLI; Fasta hit to YFEZ_ECOLI (149 aa), 73% identity in 149 aa overlap. (149 aa)
STY2686Similar to many putative acetyltransferases e.g. Streptomyces coelicolor putative acetyltransferase 2SCG1.25 TR:CAC01474 (EMBL:AL391014) (141 aa) fasta scores: E(): 1e-08, 33.6% id in 122 aa and Campylobacter jejuni streptothricin acetyltransferase homolog sat TR:Q9RGZ9 (EMBL:AF093219) (148 aa) fasta scores: E(): 1.7e-07, 29.1% id in 127 aa; Belongs to the acetyltransferase family. YpeA subfamily. (141 aa)
STY2689Putative membrane protein; Unknown function. Contains hydrophobic, possible membrane-spanning regions. (109 aa)
STY2723Conserved hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). (671 aa)
STY2843Conserved hypothetical protein; Orthologue of E. coli YFIP_ECOLI; Fasta hit to YFIP_ECOLI (232 aa), 88% identity in 226 aa overlap. (226 aa)
STY2844Putative acyl-CoA synthetase; Similar to proteins from bacteria, archaea and eukaryotes e.g. Entamoeba histolytica acetyl-CoA synthetase TR:Q9NAT4 (EMBL:AF286346) (713 aa) fasta scores: E(): 0, 34.1% id in 721 aa and Giardia lamblia acetyl-CoA synthetase TR:Q9Y1N2 (EMBL:AF107206) (726 aa) fasta scores: E(): 0, 30.0% id in 700 aa; Orthologue of E. coli YFIQ_ECOLI; Fasta hit to YFIQ_ECOLI (886 aa), 92% identity in 886 aa overlap. (886 aa)
STY3044DeoR-family trancriptional regulator; Similar to Escherichia coli hypothetical transcriptional regulator in pphb-rpos intergenic region ygbI SW:YGBI_ECOLI (P52598) (265 aa) fasta scores: E(): 0, 86.2% id in 253 aa. (254 aa)
STY3455Putative acetyltransferase; Similar to Escherichia coli hypothetical protein YhbS SW:YHBS_ECOLI (P45473) (167 aa) fasta scores: E(): 0, 96.4% id in 167 aa and to Streptomyces coelicolor putative acetyltransferase SCF56.14C TR:Q9RD52 (EMBL:AL133424) (173 aa) fasta scores: E(): 7.7e-07, 30.9% id in 165 aa; Orthologue of E. coli YHBS_ECOLI; Fasta hit to YHBS_ECOLI (167 aa), 96% identity in 167 aa overlap. (167 aa)
STY3849Putative acetyltransferase; Orthologue of E. coli yiiD (YIID_ECOLI); Fasta hit to YIID_ECOLI (329 aa), 95% identity in 313 aa overlap. (329 aa)
STY3988Putative DeoR-family transcriptional regulator; Similar to Escherichia coli deoxyribose operon repressor DeoR SW:DEOR_ECOLI (P06217) (252 aa) fasta scores: E(): 0, 38.8% id in 255 aa. (261 aa)
STY4159Putative acetyltransferase; Fasta hit to YJAB_ECOLI (147 aa), 34% identity in 134 aa overlap; Orthologue of E. coli yiaC (YIAC_ECOLI); Fasta hit to YIAC_ECOLI (146 aa), 60% identity in 145 aa overlap. (146 aa)
STY4265Possible acetyltransferase. Similar to Escherichia coli hypothetical 18.8 kDa protein in gntR-ggt intergenic region YhhY SW:YHHY_ECOLI (P46854) (162 aa) fasta scores: E(): 0, 81.5% id in 162 aa. (162 aa)
glpGPutative membrane protein; Rhomboid-type serine protease that catalyzes intramembrane proteolysis. (276 aa)
glpRSimilar to Escherichia coli glycerol-3-phosphate regulon repressor GlpR SW:GLPR_ECOLI (P09392) (252 aa) fasta scores: E(): 0, 92.9% id in 252 aa, and to Haemophilus influenzae glycerol-3-phosphate regulon repressor GlpR SW:GLPR_HAEIN (P44784) (255 aa) fasta scores: E(): 0, 60.7% id in 252 aa. Contains helix-turn-helix motif, residues 20 to 41, score 1617 (+4.69 SD). (252 aa)
yjaBPutative acetyltransferase; Orthologue of E. coli yjaB (YJAB_ECOLI); Fasta hit to YJAB_ECOLI (147 aa), 81% identity in 144 aa overlap. (145 aa)
STY4486Putative acetyltransferase; Similar to Escherichia coli PhnO protein SW:PHNO_ECOLI (P16691) (144 aa) fasta scores: E(): 0, 78.5% id in 144 aa, and to Streptomyces coelicolor hypothetical 16.7 kDa protein SCH24.35C TR:Q9X8U9 (EMBL:AL049826) (150 aa) fasta scores: E(): 4.9e-10, 33.1% id in 142 aa. (154 aa)
STY4812Putative acetyltransferase; Similar to Salmonella typhimurium hypothetical 18.3 kDa protein in miaE 3'region yYgM SW:YJGM_SALTY (Q08021) (167 aa) fasta scores: E(): 0, 99.4% id in 167 aa, and to Azospirillum brasilense IAA acetyltransferase SW:IAAT_AZOBR (P26945) (153 aa) fasta scores: E(): 3.3e-05, 27.3% id in 161 aa. (171 aa)
rimIRibosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. (148 aa)
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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