STRINGSTRING
STY0432 STY0432 STY0433 STY0433 copS copS copR copR STY3353 STY3353 STY3354 STY3354 STY3355 STY3355 STY3507 STY3507 STY3811 STY3811 STY3812 STY3812 STY3813 STY3813 arcA arcA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STY0432Phosphate regulon transcriptional regulatory protein PhoB; Fasta hit to TORR_ECOLI (230 aa), 34% identity in 231 aa overlap; Fasta hit to BAER_ECOLI (240 aa), 41% identity in 224 aa overlap; Fasta hit to YLCA_ECOLI (227 aa), 34% identity in 220 aa overlap; Fasta hit to YEDW_ECOLI (239 aa), 36% identity in 223 aa overlap; Fasta hit to OMPR_ECOLI (239 aa), 39% identity in 232 aa overlap; Fasta hit to YGIX_ECOLI (219 aa), 34% identity in 227 aa overlap; Fasta hit to ARCA_ECOLI (238 aa), 35% identity in 230 aa overlap; Fasta hit to CPXR_ECOLI (232 aa), 39% identity in 229 aa overlap; Fasta [...] (229 aa)
STY0433Phosphate regulon sensor protein PhoR; Orthologue of E. coli phoR (PHOR_ECOLI); Fasta hit to PHOR_ECOLI (431 aa), 90% identity in 431 aa overlap. (431 aa)
copSHistidine kinase; Member of a two-component regulatory system. (454 aa)
copRResponse regulator; Fasta hit to TORR_ECOLI (230 aa), 34% identity in 229 aa overlap; Fasta hit to BAER_ECOLI (240 aa), 32% identity in 224 aa overlap; Fasta hit to YLCA_ECOLI (227 aa), 52% identity in 227 aa overlap; Fasta hit to RSTA_ECOLI (242 aa), 34% identity in 228 aa overlap; Fasta hit to OMPR_ECOLI (239 aa), 34% identity in 233 aa overlap; Fasta hit to YGIX_ECOLI (219 aa), 38% identity in 220 aa overlap; Fasta hit to ARCA_ECOLI (238 aa), 33% identity in 228 aa overlap; Fasta hit to CPXR_ECOLI (232 aa), 39% identity in 227 aa overlap; Fasta hit to PHOB_ECOLI (229 aa), 37% identi [...] (248 aa)
STY3353Possible exported protein; Fasta hit to YDEI_ECOLI (130 aa), 33% identity in 129 aa overlap; Orthologue of E. coli YGIW_ECOLI; Fasta hit to YGIW_ECOLI (130 aa), 89% identity in 130 aa overlap. Contains a possible N-terminal signal sequence. (130 aa)
STY3354Probable two-component system response regulator; Member of a two-component regulatory system QseB/QseC. Activates the flagella regulon by activating transcription of flhDC (By similarity). (219 aa)
STY3355Probable two-component system sensor histidine kinase; Member of a two-component regulatory system QseB/QseC. Activates the flagella regulon by activating transcription of FlhDC. May activate QseB by phosphorylation (By similarity). (449 aa)
STY3507Aerobic respiration control sensor protein; Orthologue of E. coli arcB (ARCB_ECOLI); Fasta hit to ARCB_ECOLI (776 aa), 94% identity in 778 aa overlap. (778 aa)
STY3811Extracytoplasmic stress protein for protein-mediated toxicities; Similar to Escherichia coli periplasmic protein CpxP precursor SW:CPXP_ECOLI () (166 aa) fasta scores: E(): 0, 88.6% id in 166 aa. Contains a possible N-terminal signal sequence; Fasta hit to SPY_ECOLI (161 aa), 32% identity in 159 aa overlap. (166 aa)
STY3812Two-component response regulatory protein; Fasta hit to TORR_ECOLI (230 aa), 32% identity in 233 aa overlap; Fasta hit to BAER_ECOLI (240 aa), 39% identity in 226 aa overlap; Fasta hit to YLCA_ECOLI (227 aa), 36% identity in 232 aa overlap; Fasta hit to RSTA_ECOLI (242 aa), 34% identity in 233 aa overlap; Fasta hit to YEDW_ECOLI (239 aa), 37% identity in 231 aa overlap; Fasta hit to OMPR_ECOLI (239 aa), 40% identity in 230 aa overlap; Fasta hit to YGIX_ECOLI (219 aa), 36% identity in 228 aa overlap; Fasta hit to ARCA_ECOLI (238 aa), 34% identity in 228 aa overlap; Fasta hit to PHOB_ECO [...] (232 aa)
STY3813Similar to Escherichia coli sensor protein governing extracytoplasmic protein-mediated toxicities CpxA SW:CPXA_ECOLI (P08336) (457 aa) fasta scores: E(): 0, 96.9% id in 457 aa. (457 aa)
arcAGlobal response regulator; Similar to Escherichia coli aerobic respiration control protein ArcA SW:ARCA_ECOLI (P03026) (238 aa) fasta scores: E(): 0, 99.6% id in 238 aa, and to Haemophilus influenzae aerobic respiration control protein ArcA homolog ArcA or hi0884 SW:ARCA_HAEIN (P44918) (236 aa) fasta scores: E(): 0, 76.8% id in 237 aa. (238 aa)
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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