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| | STY0501 | Putative lyase; Similar to Mycobacterium tuberculosis putative lyase rv3684 or mtv025.032 TR:O69652 (EMBL:AL022121) (346 aa) fasta scores: E(): 0, 61.5% id in 338 aa, and to Cyanidioschyzon merolae O-acetylserine cmoastl2 TR:Q9SSV8 (EMBL:AB031004) (390 aa) fasta scores: E(): 2.3e-16, 27.4% id in 329 aa, and to Emericella nidulans cysteine synthase cysB SW:CYSK_EMENI (P50867) (371 aa) fasta scores: E(): 1.7e-14, 25.6% id in 332 aa. (351 aa) |
| | STY0561 | Hypothetical ATP-binding protein; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. (364 aa) |
| | STY0658 | Similar to Escherichia coli hypothetical 23.6 kDa protein in speg-dgsa intergenic region precursor ynfI SW:YNFI_ECOLI (P76174; P77270) (207 aa) fasta scores: E(): 2.7e-06, 33.0% id in 97 aa, and to Escherichia coli TorD protein torD SW:TORD_ECOLI (P36662) (199 aa) fasta scores: E(): 0.00069, 25.8% id in 159 aa. (160 aa) |
| | STY0659 | Similar to Bacillus subtilis assimilatory nitrate reductase catalytic subunit nasc or narb or nasbB SW:NASC_BACSU (P42434) (710 aa) fasta scores: E(): 7.4e-33, 24.5% id in 702 aa, and to Salmonella typhimurium thiosulfate reductase precursor phsA SW:PHSA_SALTY (P37600) (758 aa) fasta scores: E(): 1.2e-29, 28.5% id in 743 aa; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (759 aa) |
| | STY0660 | Molybdopterin-containing oxidoreductase iron-sulfur subunit; Similar to Escherichia coli anaerobic dimethyl sulfoxide reductase chain b dmsB SW:DMSB_ECOLI (P18776; P77745) (204 aa) fasta scores: E(): 2.7e-22, 41.3% id in 150 aa, and to Salmonella typhimurium thiosulfate reductase electron transport protein PhsB phsB SW:PHSB_SALTY (P37601) (192 aa) fasta scores: E(): 2.2e-16, 35.6% id in 149 aa; Fasta hit to YGFS_ECOLI (162 aa), 38% identity in 153 aa overlap; Fasta hit to HYDN_ECOLI (175 aa), 36% identity in 166 aa overlap; Fasta hit to YSAA_ECOLI (157 aa), 39% identity in 155 aa overl [...] (185 aa) |
| | STY0661 | Molybdopterin-containing oxidoreductase membrane anchor subunit; Similar to Escherichia coli anaerobic dimethyl sulfoxide reductase chain c dmsC SW:DMSC_ECOLI (P18777) (287 aa) fasta scores: E(): 4.5e-05, 27.0% id in 274 aa. (255 aa) |
| | hcr | NADH oxidoreductase Hcr; Similar to Escherichia coli NADH oxidoreductase Hcr SW:HCR_ECOLI (P75824) (322 aa) fasta scores: E(): 0, 89.1% id in 322 aa, and to Escherichia coli putative dioxygenase beta subunit YeaX yeaX SW:YEAX_ECOLI (P76254) (321 aa) fasta scores: E(): 2e-15, 26.8% id in 325 aa, and to Pseudomonas putida phthalate 4,5-dioxygenase oxygenase reductase subunit pht2 SW:PHT2_PSEPU (Q05182) (324 aa) fasta scores: E(): 9.1e-15, 26.8% id in 291 aa; Orthologue of E. coli HCR_ECOLI; Fasta hit to HCR_ECOLI (322 aa), 89% identity in 322 aa overlap. (323 aa) |
| | STY0933 | Prismane protein homolog (hybrid-cluster protein); Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. (550 aa) |
| | STY0962 | Anaerobic dimethyl sulfoxide reductase chain A precursor; Fasta hit to P77783 (808 aa), 67% identity in 817 aa overlap; Fasta hit to TORA_ECOLI (848 aa), 32% identity in 862 aa overlap; Fasta hit to P77374 (808 aa), 69% identity in 804 aa overlap; Fasta hit to BISC_ECOLI (777 aa), 33% identity in 752 aa overlap; Fasta hit to BISZ_ECOLI (809 aa), 31% identity in 843 aa overlap; Orthologue of E. coli dmsA (DMSA_ECOLI); Fasta hit to DMSA_ECOLI (785 aa), 93% identity in 784 aa overlap; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (814 aa) |
| | STY0963 | Anaerobic dimethyl sulfoxide reductase chain B; Fasta hit to P77313 (205 aa), 93% identity in 205 aa overlap; Fasta hit to HYFA_ECOLI (205 aa), 30% identity in 188 aa overlap; Fasta hit to NRFC_ECOLI (223 aa), 35% identity in 188 aa overlap; Fasta hit to HYDN_ECOLI (175 aa), 38% identity in 167 aa overlap; Fasta hit to YSAA_ECOLI (157 aa), 34% identity in 164 aa overlap; Orthologue of E. coli dmsB (DMSB_ECOLI); Fasta hit to DMSB_ECOLI (204 aa), 97% identity in 204 aa overlap. (205 aa) |
| | STY0964 | Anaerobic dimethyl sulfoxide reductase chain C; Fasta hit to P76173 (284 aa), 58% identity in 286 aa overlap; Orthologue of E. coli dmsC (DMSC_ECOLI); Fasta hit to DMSC_ECOLI (287 aa), 90% identity in 287 aa overlap. (287 aa) |
| | STY1287 | Nitrite extrusion protein (nitrite facilitator); Fasta hit to NARU_ECOLI (462 aa), 75% identity in 458 aa overlap; Orthologue of E. coli narK (NARK_ECOLI); Fasta hit to NARK_ECOLI (463 aa), 95% identity in 462 aa overlap. (465 aa) |
| | STY1288 | Respiratory nitrate reductase 1 alpha chain; Fasta hit to NARZ_ECOLI (1245 aa), 79% identity in 1247 aa overlap; Orthologue of E. coli narG (NARG_ECOLI); Fasta hit to NARG_ECOLI (1246 aa), 95% identity in 1246 aa overlap; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1247 aa) |
| | STY1289 | Respiratory nitrate reductase 1 beta chain; Fasta hit to NARY_ECOLI (514 aa), 81% identity in 505 aa overlap; Orthologue of E. coli narH (NARH_ECOLI); Fasta hit to NARH_ECOLI (512 aa), 93% identity in 511 aa overlap. (511 aa) |
| | STY1290 | Respiratory nitrate reductase 1 delta chain; Fasta hit to NARW_ECOLI (231 aa), 55% identity in 233 aa overlap; Orthologue of E. coli narJ (NARJ_ECOLI); Fasta hit to NARJ_ECOLI (236 aa), 88% identity in 236 aa overlap. (236 aa) |
| | STY1291 | Respiratory nitrate reductase 1 gamma chain; Fasta hit to NARV_ECOLI (226 aa), 72% identity in 224 aa overlap; Orthologue of E. coli narI (NARI_ECOLI); Fasta hit to NARI_ECOLI (225 aa), 92% identity in 225 aa overlap. (225 aa) |
| | STY1337 | Cys regulon transcriptional activator; Fasta hit to CBL_ECOLI (316 aa), 42% identity in 313 aa overlap; Orthologue of E. coli cysB (CYSB_ECOLI); Fasta hit to CYSB_ECOLI (324 aa), 95% identity in 324 aa overlap; Belongs to the LysR transcriptional regulatory family. (324 aa) |
| | STY1351 | Similar to Escherichia coli hypothetical 45.1 kDa protein in rnb-fabI intergenic region YciW SW:YCIW_ECOLI (P76035) (401 aa) fasta scores: E(): 0, 52.3% id in 306 aa. (306 aa) |
| | STY1484 | Conserved hypothetical protein; Orthologue of E. coli yddE (YDDE_ECOLI); Fasta hit to YDDE_ECOLI (297 aa), 82% identity in 295 aa overlap. (297 aa) |
| | STY1485 | Respiratory nitrate reductase 2 gamma chain; Fasta hit to NARI_ECOLI (225 aa), 72% identity in 224 aa overlap; Orthologue of E. coli narV (NARV_ECOLI); Fasta hit to NARV_ECOLI (226 aa), 97% identity in 226 aa overlap. (226 aa) |
| | STY1486 | Respiratory nitrate reductase 2 delta chain; Fasta hit to NARJ_ECOLI (236 aa), 58% identity in 233 aa overlap; Orthologue of E. coli narW (NARW_ECOLI); Fasta hit to NARW_ECOLI (231 aa), 82% identity in 231 aa overlap. (231 aa) |
| | STY1487 | Respiratory nitrate reductase 2 beta chain; Fasta hit to NARH_ECOLI (512 aa), 80% identity in 506 aa overlap; Orthologue of E. coli narY (NARY_ECOLI); Fasta hit to NARY_ECOLI (514 aa), 95% identity in 514 aa overlap. (514 aa) |
| | STY1488 | Respiratory nitrate reductase 2 alpha chain; Fasta hit to NARG_ECOLI (1246 aa), 79% identity in 1247 aa overlap; Orthologue of E. coli narZ (NARZ_ECOLI); Fasta hit to NARZ_ECOLI (1245 aa), 90% identity in 1245 aa overlap; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1242 aa) |
| | STY1489 | Nitrite extrusion protein; Fasta hit to NARK_ECOLI (463 aa), 76% identity in 450 aa overlap; Orthologue of E. coli narU (NARU_ECOLI); Fasta hit to NARU_ECOLI (462 aa), 85% identity in 462 aa overlap. (462 aa) |
| | STY1507 | Putative aminotransferase; Orthologue of E. coli malY (MALY_ECOLI); Fasta hit to MALY_ECOLI (390 aa), 34% identity in 384 aa overlap. (393 aa) |
| | STY1523 | Uptake hydrogenase small subunit; Fasta hit to MBHT_ECOLI (372 aa), 40% identity in 366 aa overlap; Orthologue of E. coli hyaA (MBHS_ECOLI); Fasta hit to MBHS_ECOLI (372 aa), 73% identity in 360 aa overlap. (367 aa) |
| | hyaC2 | Similar to Escherichia coli probable ni/fe-hydrogenase 1 b-type cytochrome subunit hyaC SW:CYBH_ECOLI (P19929) (235 aa) fasta scores: E(): 0, 54.4% id in 226 aa. (242 aa) |
| | STY1527 | Similar to Escherichia coli hydrogenase 1 maturation protease SW:HYAD_ECOLI () (195 aa) fasta scores: E(): 0, 53.6% id in 179 aa. (202 aa) |
| | STY1528 | Similar to Escherichia coli hydrogenase isoenzymes formation protein HypC hypC SW:HYPC_ECOLI (P24191) (90 aa) fasta scores: E(): 0.03, 38.7% id in 75 aa, and to Rhizobium leguminosarum hydrogenase expression/formation protein HupF hupF SW:HUPF_RHILV (P27651) (98 aa) fasta scores: E(): 7.4e-11, 40.8% id in 98 aa. (99 aa) |
| | hyaE2 | Similar to Escherichia coli hydrogenase-1 operon protein HyaE hyaE SW:HYAE_ECOLI (P19931) (132 aa) fasta scores: E(): 3e-10, 36.4% id in 99 aa. (136 aa) |
| | hyaF2 | Similar to Escherichia coli hydrogenase-1 operon protein HyaF hyaF SW:HYAF_ECOLI (P19932) (285 aa) fasta scores: E(): 6.2e-26, 32.4% id in 278 aa, and to Alcaligenes eutrophus hydrogenase expression/formation protein HoxQ hoxQ SW:HOXQ_ALCEU (P31911) (282 aa) fasta scores: E(): 1.5e-30, 37.8% id in 288 aa. (353 aa) |
| | STY1565 | Putative dimethyl sulphoxide reductase subunit; Fasta hit to DMSA_ECOLI (785 aa), 68% identity in 791 aa overlap; Fasta hit to P77783 (808 aa), 71% identity in 805 aa overlap; Fasta hit to TORA_ECOLI (848 aa), 31% identity in 867 aa overlap; Fasta hit to BISC_ECOLI (777 aa), 31% identity in 779 aa overlap; Orthologue of E. coli P77374; Fasta hit to P77374 (808 aa), 87% identity in 812 aa overlap; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (812 aa) |
| | STY1566 | Putative dimethyl sulphoxide reductase subunit; Fasta hit to DMSA_ECOLI (785 aa), 65% identity in 788 aa overlap; Fasta hit to P77374 (808 aa), 71% identity in 802 aa overlap; Fasta hit to BISC_ECOLI (777 aa), 31% identity in 748 aa overlap; Orthologue of E. coli P77783; Fasta hit to P77783 (808 aa), 92% identity in 810 aa overlap; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (811 aa) |
| | STY1567 | Similar to Yersinia pestis dimethyl sulfoxide reductase subunit b dmsB TR:Q9X6B5 (EMBL:AF135170) (205 aa) fasta scores: E(): 0, 85.9% id in 205 aa; Fasta hit to P77313 (205 aa), 92% identity in 205 aa overlap; Fasta hit to HYFA_ECOLI (205 aa), 30% identity in 188 aa overlap; Fasta hit to NRFC_ECOLI (223 aa), 35% identity in 188 aa overlap; Fasta hit to HYDN_ECOLI (175 aa), 38% identity in 167 aa overlap; Fasta hit to YSAA_ECOLI (157 aa), 34% identity in 164 aa overlap; Paralogue of E. coli dmsB (DMSB_ECOLI); Fasta hit to DMSB_ECOLI (204 aa), 96% identity in 204 aa overlap. (205 aa) |
| | STY1568 | Putative dimethyl sulphoxide reductase subunit; Fasta hit to DMSC_ECOLI (287 aa), 59% identity in 288 aa overlap; Orthologue of E. coli P76173; Fasta hit to P76173 (284 aa), 76% identity in 284 aa overlap. (284 aa) |
| | STY1569 | Conserved hypothetical protein; Required for biogenesis/assembly of DMSO reductase, but not for the interaction of the DmsA signal peptide with the Tat system. May be part of a chaperone cascade complex that facilitates a folding- maturation pathway for the substrate protein. (204 aa) |
| | ttrR | Putative two-component response regulator; Similar to Salmonella typhimurium TtrR TR:Q9Z4T0 (EMBL:AJ224978) (206 aa) fasta scores: E(): 0, 100.0% id in 206 aa, and to Rhodobacter capsulatus c4-dicarboxylate transport transcriptional regulatory protein DctR SW:DCTR_RHOCA (P37740) (197 aa) fasta scores: E(): 2.1e-22, 39.1% id in 192 aa; Fasta hit to NARL_ECOLI (216 aa), 30% identity in 200 aa overlap; Paralogue of E. coli uhpA (UHPA_ECOLI); Fasta hit to UHPA_ECOLI (196 aa), 34% identity in 196 aa overlap. (206 aa) |
| | ttrB | Similar to Salmonella typhimurium tetrathionate reductase subunit B TtrB TR:Q9Z4S8 (EMBL:AJ224978) (250 aa) fasta scores: E(): 0, 100.0% id in 250 aa and to Salmonella typhimurium thiosulfate reductase electron transport protein PhsB SW:PHSB_SALTY (P37601) (192 aa) fasta scores: E(): 1.1e-25, 46.4% id in 151 aa; Fasta hit to P77375 (239 aa), 33% identity in 228 aa overlap; Paralogue of E. coli nrfC (NRFC_ECOLI); Fasta hit to NRFC_ECOLI (223 aa), 41% identity in 222 aa overlap. (250 aa) |
| | ttrC | Similar to Salmonella typhimurium tetrathionate reductase subunit C TtrC TR:Q9Z4S7 (EMBL:AJ224978) (340 aa) fasta scores: E(): 0, 98.2% id in 340 aa. (340 aa) |
| | ttrA | Similar to Salmonella typhimurium tetrathionate reductase subunit A TtrA TR:Q9Z4S6 (EMBL:AJ224978) (1020 aa) fasta scores: E(): 0, 99.7% id in 1020 aa and to Archaeoglobus fulgidus molybdopterin oxidoreductase, molybdopterin binding subunit, putative af0159 TR:O30078 (EMBL:AE001095) (1134 aa) fasta scores: E(): 6.4e-33, 31.1% id in 1000 aa; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1020 aa) |
| | STY1755 | Putative transporter; Similar to Haemophilus influenzae hypothetical symporter Hi1154 hi1154 SW:YB54_HAEIN (P45079) (440 aa) fasta scores: E(): 0, 41.3% id in 438 aa; Paralogue of E. coli P77529; Fasta hit to P77529 (463 aa), 46% identity in 439 aa overlap; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (448 aa) |
| | STY1765 | Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). (480 aa) |
| | STY1791 | Putative sodium:dicarboxylate symporter; Similar to Escherichia coli hypothetical symporter YdjN ydjN SW:YDJN_ECOLI (P77529) (463 aa) fasta scores: E(): 0, 95.9% id in 462 aa, and to Escherichia coli proton glutamate symport protein gltP SW:GLTP_ECOLI (P21345) (437 aa) fasta scores: E(): 2.7e-24, 27.6% id in 434 aa; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (463 aa) |
| | STY1817 | Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. (347 aa) |
| | STY1849 | Conserved hypothetical protein; Orthologue of E. coli YOAG_ECOLI; Fasta hit to YOAG_ECOLI (60 aa), 95% identity in 60 aa overlap. (60 aa) |
| | STY1850 | Conserved hypothetical protein; Orthologue of E. coli YEAR_ECOLI; Fasta hit to YEAR_ECOLI (119 aa), 84% identity in 119 aa overlap. (120 aa) |
| | STY1914 | Hydrogenase-1 large chain (nifE hydrogenase); Fasta hit to MBHM_ECOLI (566 aa), 42% identity in 593 aa overlap; Orthlogue of E. coli hyaB (MBHL_ECOLI); Fasta hit to MBHL_ECOLI (597 aa), 91% identity in 597 aa overlap; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (597 aa) |
| | STY1915 | Probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit; Orthologue of E. coli hyaC (CYBH_ECOLI); Fasta hit to CYBH_ECOLI (235 aa), 83% identity in 230 aa overlap. (243 aa) |
| | STY1916 | Hydrogenase-1 operon protein HyaD; Fasta hit to HYBD_ECOLI (164 aa), 38% identity in 160 aa overlap; Orthologue of E. coli hyaD (HYAD_ECOLI); Fasta hit to HYAD_ECOLI (195 aa), 87% identity in 192 aa overlap. (198 aa) |
| | STY1917 | Hydrogenase-1 operon protein HyaE; Orthologue of E. coli hyaE (HYAE_ECOLI); Fasta hit to HYAE_ECOLI (132 aa), 71% identity in 133 aa overlap. (134 aa) |
| | STY1918 | Hydrogenase-1 operon protein HyaF; Orthologue of E. coli hyaF (HYAF_ECOLI); Fasta hit to HYAF_ECOLI (285 aa), 75% identity in 279 aa overlap. (282 aa) |
| | STY1937 | Conserved hypothetical protein; Paralogue of E. coli YEAR_ECOLI; Fasta hit to YEAR_ECOLI (119 aa), 43% identity in 112 aa overlap. (113 aa) |
| | STY2161 | Putative deaminase; Catalyzes the alpha,beta-elimination reaction of D-cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine; Belongs to the ACC deaminase/D-cysteine desulfhydrase family. (328 aa) |
| | phsC | Similar to Salmonella typhimurium thiosulfate reductase cytochrome b subunit phsC SW:PHSC_SALTY (P37602; P37603; Q56120) (254 aa) fasta scores: E(): 0, 99.6% id in 254 aa; Orthologue of E. coli PHSC_ECOLI; Fasta hit to PHSC_ECOLI (261 aa), 57% identity in 242 aa overlap. Contains hydrophobic, probable membrane-spanning regions. (254 aa) |
| | phsB | Thiosulfate reductase electron transport protein PhsB; Component of the PhsABC thiosulfate reductase that catalyzes the reduction of thiosulfate to sulfite and hydrogen sulfide, with menaquinol as the sole electron donor. Proton motive force (PMF) is required to drive transmembrane electron transfer within the reductase. The PhsB subunit transfers electrons between PhsC and PhsA. (192 aa) |
| | phsA | Similar to Salmonella typhimurium thiosulfate reductase precursor phsA SW:PHSA_SALTY (P37600) (758 aa) fasta scores: E(): 0, 99.6% id in 758 aa. Contains a probable N-terminal signal sequence; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (758 aa) |
| | STY2426 | Putative membrane protein; Orthologue of E. coli yeiB (YEIB_ECOLI); Fasta hit to YEIB_ECOLI (385 aa), 84% identity in 377 aa overlap. Contains hydrophobic, probable membrane-spanning regions. (380 aa) |
| | ccmH1 | Cytochrome c-type biogenesis protein H1; Possible subunit of a heme lyase. (347 aa) |
| | dsbE1 | Thiol:disulfide interchange protein; Involved in disulfide bond formation. Catalyzes a late, reductive step in the assembly of periplasmic c-type cytochromes, probably the reduction of disulfide bonds of the apocytochrome c to allow covalent linkage with the heme. Possible subunit of a heme lyase (By similarity); Belongs to the thioredoxin family. DsbE subfamily. (185 aa) |
| | ccmF1 | Cytochrome c-type biogenesis protein F1; Fasta hit to NRFE_ECOLI (552 aa), 38% identity in 611 aa overlap; Orthologue of E. coli ccmF (CCMF_ECOLI); Fasta hit to CCMF_ECOLI (647 aa), 85% identity in 646 aa overlap. (643 aa) |
| | ccmE1 | Cytochrome c-type biogenesis protein E1; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. (159 aa) |
| | ccmD1 | Heme exporter protein D1; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. (70 aa) |
| | ccmC1 | Heme exporter protein C1; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. (245 aa) |
| | ccmB1 | Heme exporter protein B1; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. (219 aa) |
| | ccmA1 | Heme exporter protein A1; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (205 aa) |
| | STY2481 | Cytochrome c-type protein NapC; Orthologue of E. coli napC (NAPC_ECOLI); Fasta hit to NAPC_ECOLI (200 aa), 88% identity in 200 aa overlap. (200 aa) |
| | STY2482 | Cytochrome c-type protein NapB precursor; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (149 aa) |
| | STY2483 | Ferredoxin-type protein NapH; Orthologue of E. coli napH (NAPH_ECOLI); Fasta hit to NAPH_ECOLI (287 aa), 89% identity in 278 aa overlap. (289 aa) |
| | STY2484 | Ferredoxin-type protein NapG; Orthologue of E. coli napG (NAPG_ECOLI); Fasta hit to NAPG_ECOLI (231 aa), 94% identity in 231 aa overlap. (231 aa) |
| | STY2485 | Probable nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (828 aa) |
| | STY2486 | Putative napAB assembly protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. (87 aa) |
| | STY2487 | Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family. (163 aa) |
| | STY2666 | Cysteine synthase A; Two cysteine synthase enzymes are found. Both catalyze the same reaction. Cysteine synthase B can also use thiosulfate in place of sulfide to give cysteine thiosulfonate as a product (By similarity). (323 aa) |
| | STY2677 | Cysteine synthase B; Similar to Salmonella typhimurium LT2 cysteine synthase B cysM SW:CYSM_SALTY (P29848) (303 aa) fasta scores: E(): 0, 98.7% id in 303 aa; Fasta hit to CYSK_ECOLI (322 aa), 44% identity in 307 aa overlap; Orthologue of E. coli cysM (CYSM_ECOLI); Fasta hit to CYSM_ECOLI (303 aa), 93% identity in 303 aa overlap; Belongs to the cysteine synthase/cystathionine beta- synthase family. (303 aa) |
| | STY2678 | Sulphate transport ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (364 aa) |
| | STY2679 | Sulphate transport system permease protein CysW; Fasta hit to CYST_ECOLI (277 aa), 37% identity in 259 aa overlap; Orthologue of E. coli cysW (CYSW_ECOLI); Fasta hit to CYSW_ECOLI (291 aa), 97% identity in 291 aa overlap. (291 aa) |
| | STY2680 | Sulphate transport system permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (277 aa) |
| | STY2681 | Similar to Salmonella typhimurium thiosulphate-binding protein precursor cysP SW:CYSP_SALTY (P41031) (338 aa) fasta scores: E(): 0, 97.3% id in 338 aa; Fasta hit to SUBI_ECOLI (329 aa), 47% identity in 320 aa overlap; Orthologue of E. coli cysP (CYSP_ECOLI); Fasta hit to CYSP_ECOLI (338 aa), 94% identity in 337 aa overlap. (338 aa) |
| | STY2772 | Putative polyferredoxin; Shows weak similarity to Methanobacterium thermoautotrophicum polyferredoxin MTH1241 TR:O27309 (EMBL:AE000891) (448 aa) fasta scores: E(): 7.1e-05, 26.1% id in 291 aa and Methanobacterium thermoautotrophicum polyferredoxin ehbK TR:Q9V2Y0 (EMBL:AJ243656) (447 aa) fasta scores: E(): 0.00016, 25.4% id in 287 aa. (287 aa) |
| | STY2773 | Similar to Haemophilus influenzae anaerobic dimethyl sulfoxide reductase chain C dmsC or HI1045 SW:DMSC_HAEIN (P45002) (279 aa) fasta scores: E(): 1.5e-08, 25.4% id in 283 aa; Paralogue of E. coli dmsC (DMSC_ECOLI); Fasta hit to DMSC_ECOLI (287 aa), 33% identity in 285 aa overlap. Contains hydrophobic, probable membrane-spanning regions. (269 aa) |
| | STY2774 | Similar to Haemophilus influenzae anaerobic dimethyl sulfoxide reductase chain B dmsB or HI1046 SW:DMSB_HAEIN (P45003) (205 aa) fasta scores: E(): 0, 51.8% id in 193 aa; Fasta hit to P77313 (205 aa), 55% identity in 192 aa overlap; Paralogue of E. coli dmsB (DMSB_ECOLI); Fasta hit to DMSB_ECOLI (204 aa), 56% identity in 192 aa overlap. (209 aa) |
| | STY2779 | Putative thiosulfate sulfurtransferase; Similar to many eukaryotic proteins e.g. Homo sapiens 3-mercaptopyruvate sulfurtransferase mpsT or tst2 SW:THTM_HUMAN (P25325) (296 aa) fasta scores: E(): 0, 41.1% id in 280 aa; Orthologue of E. coli sseA (THTR_ECOLI); Fasta hit to THTR_ECOLI (280 aa), 81% identity in 278 aa overlap. (280 aa) |
| | STY2780 | Hypothetical protein; No significant database matches. Unknown function. (222 aa) |
| | asrA | Similar to Salmonella typhimurium anaerobic sulfite reductase subunit A asrA SW:ASRA_SALTY (P26474) (347 aa) fasta scores: E(): 0, 99.1% id in 347 aa. (347 aa) |
| | asrB | Similar to Salmonella typhimurium anaerobic sulfite reductase subunit B SW:ASRB_SALTY (P26475) (272 aa) fasta scores: E(): 0, 99.3% id in 272 aa. (272 aa) |
| | asrC | Anaerobic sulfite reductase subunit C; This enzyme catalyzes the hydrogen sulfide production from sulfite. It is strictly anaerobic. It is regulated by electron acceptors rather than by cysteine (By similarity). (337 aa) |
| | STY2803 | Flavohemoprotein (haemoglobin-like protein); Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. (396 aa) |
| | yfhH | Putative transcriptional regulator; Similar to Escherichia coli hypothetical protein yfhH SW:YFHH_ECOLI (P37767) (282 aa) fasta scores: E(): 0, 83.0% id in 282 aa. Similar to transcriptional regulators e.g. Escherichia coli hex regulon repressor hexR SW:HEXR_ECOLI (P46118) (289 aa) fasta scores: E(): 4.2e-13, 26.0% id in 281 aa. (282 aa) |
| | STY2820 | Similar to transporter proteins e.g. Oxalobacter formigenes oxalate:formate antiport protein oxlT TR:Q51330 (EMBL:U40075) (418 aa) fasta scores: E(): 6.6e-27, 28.5% id in 383 aa, including Streptococcus mitis PblT pblT TR:AAG18633 (EMBL:AY007504) (399 aa) fasta scores: E(): 0, 37.0% id in 400 aa, reported (unpublished) to be a locus mediating binding to human platelets in Streptococcus mitis. Contains hydrophobic, probable membrane-spanning regions. (398 aa) |
| | STY2961 | Putative sigma-54-dependent transriptional regulator; Required for the expression of anaerobic nitric oxide (NO) reductase, acts as a transcriptional activator for at least the norVW operon. Activation also requires sigma-54. (506 aa) |
| | STY2962 | Putative flavoprotein; Anaerobic nitric oxide reductase; uses NADH to detoxify nitric oxide (NO), protecting several 4Fe-4S NO-sensitive enzymes. Has at least 2 reductase partners, only one of which (NorW, flavorubredoxin reductase) has been identified. NO probably binds to the di-iron center; electrons enter from the NorW at rubredoxin and are transferred sequentially to the FMN center and the di-iron center. Also able to function as an aerobic oxygen reductase; In the N-terminal section; belongs to the zinc metallo- hydrolase group 3 family. (479 aa) |
| | STY2963 | Putative rubredoxin reductase; One of at least two accessory proteins for anaerobic nitric oxide (NO) reductase. Reduces the rubredoxin moiety of NO reductase. (377 aa) |
| | hypf | Hydrogenase maturation protein; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. (746 aa) |
| | hydN | Electron transport protein; Fasta hit to YSAA_ECOLI (157 aa), 62% identity in 162 aa overlap; Fasta hit to P77186 (208 aa), 32% identity in 170 aa overlap; Fasta hit to YGFS_ECOLI (162 aa), 41% identity in 167 aa overlap; Fasta hit to HYCB_ECOLI (203 aa), 40% identity in 187 aa overlap; Fasta hit to HYFA_ECOLI (205 aa), 35% identity in 196 aa overlap; Fasta hit to DMSB_ECOLI (204 aa), 36% identity in 194 aa overlap; Fasta hit to P77313 (205 aa), 36% identity in 194 aa overlap; Orthologue of E. coli hydN (HYDN_ECOLI); Fasta hit to HYDN_ECOLI (175 aa), 96% identity in 173 aa overlap. (181 aa) |
| | STY2966 | Putative exported protein; Unknown function. Contains a probable N-terminal signal sequence. (259 aa) |
| | STY2967 | Hydrogenase 3 maturation protease; Orthologue of E. coli hycI (HYCI_ECOLI); Fasta hit to HYCI_ECOLI (155 aa), 92% identity in 154 aa overlap. (156 aa) |
| | STY2968 | Formate hydrogenlyase maturation protein; Fasta hit to P76566 (158 aa), 48% identity in 131 aa overlap; Orthologue of E. coli hycH (HYCH_ECOLI); Fasta hit to HYCH_ECOLI (136 aa), 92% identity in 136 aa overlap. (136 aa) |
| | STY2969 | Formate hydrogenlyase subunit 7; Fasta hit to HYFI_ECOLI (252 aa), 62% identity in 250 aa overlap; Orthologue of E. coli hycG (HYCG_ECOLI); Fasta hit to HYCG_ECOLI (255 aa), 97% identity in 255 aa overlap. (255 aa) |
| | STY2970 | Formate hydrogenlyase subunit 6; Fasta hit to HYFH_ECOLI (181 aa), 47% identity in 172 aa overlap; Orthologue of E. coli hycF (HYCF_ECOLI); Fasta hit to HYCF_ECOLI (180 aa), 97% identity in 178 aa overlap. (180 aa) |
| | STY2971 | Formate hydrogenlyase subunit 5; Fasta hit to HYFG_ECOLI (555 aa), 72% identity in 563 aa overlap; Orthologue of E. coli hycE (HYCE_ECOLI); Fasta hit to HYCE_ECOLI (569 aa), 97% identity in 569 aa overlap. (569 aa) |
| | STY2972 | Formate hydrogenlyase subunit 4; Fasta hit to HYFC_ECOLI (315 aa), 54% identity in 301 aa overlap; Orthologue of E. coli hycD (HYCD_ECOLI); Fasta hit to HYCD_ECOLI (307 aa), 91% identity in 307 aa overlap. (307 aa) |
| | STY2973 | Formate hydrogenlyase subunit 3; Fasta hit to HYFB_ECOLI (672 aa), 38% identity in 607 aa overlap; Orthologue of E. coli hycC (HYCC_ECOLI); Fasta hit to HYCC_ECOLI (608 aa), 89% identity in 608 aa overlap. (608 aa) |
| | STY2974 | Formate hydrogenlyase subunit 2; Fasta hit to YSAA_ECOLI (157 aa), 38% identity in 187 aa overlap; Fasta hit to YGFS_ECOLI (162 aa), 36% identity in 181 aa overlap; Fasta hit to HYFA_ECOLI (205 aa), 51% identity in 186 aa overlap; Fasta hit to HYDN_ECOLI (175 aa), 39% identity in 190 aa overlap; Orthologue of E. coli hycB (HYCB_ECOLI); Fasta hit to HYCB_ECOLI (203 aa), 96% identity in 202 aa overlap. (202 aa) |
| | STY2975 | Formate hydrogenlyase regulatory protein; Orthologue of E. coli hycA (HYCA_ECOLI); Fasta hit to HYCA_ECOLI (153 aa), 89% identity in 152 aa overlap. (153 aa) |
| | STY2976 | HypA protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (118 aa) |
| | STY2977 | Hydrogenase isoenzymes formation protein HypB; Orthologue of E. coli hypB (HYPB_ECOLI); Fasta hit to HYPB_ECOLI (290 aa), 95% identity in 290 aa overlap. (290 aa) |
| | hypC | Similar to Escherichia coli hydrogenase isoenzymes formation protein HypC SW:HYPC_ECOLI (P24191) (90 aa) fasta scores: E(): 0, 96.7% id in 90 aa; Fasta hit to HYBG_ECOLI (82 aa), 59% identity in 81 aa overlap; Orthologue of E. coli hypC (HYPC_ECOLI); Fasta hit to HYPC_ECOLI (90 aa), 97% identity in 90 aa overlap. (90 aa) |
| | STY2979 | Hydrogenase isoenzymes formation protein HypD; Orthologue of E. coli hypD (HYPD_ECOLI); Fasta hit to HYPD_ECOLI (373 aa), 95% identity in 372 aa overlap; Belongs to the HypD family. (373 aa) |
| | STY2980 | Hydrogenase isoenzymes formation protein HypE; Orthologue of E. coli hypE (HYPE_ECOLI); Fasta hit to HYPE_ECOLI (322 aa), 92% identity in 322 aa overlap. (322 aa) |
| | STY2982 | Similar to Proteus mirabilis hypothetical protein (fragment) ygbA TR:O86435 (EMBL:AJ000084) (75 aa) fasta scores: E(): 2.9e-23, 73.0% id in 74 aa; Orthologue of E. coli ygbA (YGBA_ECOLI); Fasta hit to YGBA_ECOLI (117 aa), 88% identity in 114 aa overlap. (114 aa) |
| | cysC | Adenosine 5-phosphosulfate kinase; Catalyzes the synthesis of activated sulfate. (201 aa) |
| | cysN | ATP sulfurylase (ATP:sulfate adenyltransferase) subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (479 aa) |
| | cysD | ATP sulfurylase (ATP:sulfate adenyltransferase); Orthologue of E. coli cysD (CYSD_ECOLI); Fasta hit to CYSD_ECOLI (302 aa), 97% identity in 302 aa overlap. (302 aa) |
| | STY3074 | 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase; Reduction of activated sulfate into sulfite. (244 aa) |
| | STY3075 | Sulfite reductase (NADPH) hemoprotein alpha subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (570 aa) |
| | STY3076 | Sulfite reductase (NADPH) flavoprotein beta subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (599 aa) |
| | STY3205 | Putative membrane protein; Orthologue of E. coli YQFA_ECOLI; Fasta hit to YQFA_ECOLI (219 aa), 91% identity in 219 aa overlap. Contains multiple possible membrane spanning hydrophobic domains. (219 aa) |
| | STY3314 | Hydrogenase-2 component protein; Fasta hit to HYPC_ECOLI (90 aa), 56% identity in 81 aa overlap; Orthologue of E. coli hybG (HYBG_ECOLI); Fasta hit to HYBG_ECOLI (82 aa), 94% identity in 82 aa overlap. (82 aa) |
| | STY3315 | Hydrogenase-2 component protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa) |
| | STY3316 | Hydrogenase-2 component protein; Orthologue of E. coli hybE (HYBE_ECOLI); Fasta hit to HYBE_ECOLI (162 aa), 80% identity in 162 aa overlap. (162 aa) |
| | STY3317 | Hydrogenase-2 component protein; Fasta hit to HYAD_ECOLI (195 aa), 38% identity in 159 aa overlap; Orthologue of E. coli hybD (HYBD_ECOLI); Fasta hit to HYBD_ECOLI (164 aa), 94% identity in 163 aa overlap. (164 aa) |
| | STY3318 | Hydrogenase-2 large subunit; Fasta hit to MBHL_ECOLI (597 aa), 43% identity in 595 aa overlap; Orthologue of E. coli hybC (MBHM_ECOLI); Fasta hit to MBHM_ECOLI (566 aa), 94% identity in 566 aa overlap; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (567 aa) |
| | STY3319 | Probable hydrogenase-2 cytochrome b subunit; Orthologue of E. coli hybB (HYBB_ECOLI); Fasta hit to HYBB_ECOLI (392 aa), 96% identity in 392 aa overlap. Contains multiple possible membrane spanning hydrophobic domains. (392 aa) |
| | STY3320 | Hydrogenase-2 small subunit; Fasta hit to FDNH_ECOLI (294 aa), 32% identity in 305 aa overlap; Orthologue of E. coli hybA (HYBA_ECOLI); Fasta hit to HYBA_ECOLI (328 aa), 95% identity in 328 aa overlap. (328 aa) |
| | hyb0 | Similar to Escherichia coli hydrogenase-2 small chain precursor Hyb0 SW:MBHT_ECOLI (Q46847) (372 aa) fasta scores: E(): 0, 96.8% id in 372 aa. Contains multiple possible membrane spanning hydrophobic domains. (372 aa) |
| | STY3808 | Periplasmic sulphate binding protein; Fasta hit to CYSP_ECOLI (338 aa), 46% identity in 323 aa overlap; Orthologue of E. coli sbp (SUBI_ECOLI); Fasta hit to SUBI_ECOLI (329 aa), 94% identity in 329 aa overlap. (329 aa) |
| | STY3838 | FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. (267 aa) |
| | fdoG | Highly similar to Escherichia coli formate dehydrogenase-O, major subunit fdoG SW:FDOG_ECOLI (P32176; P78131) (1016 aa). Contains a stop codon (codon 196) which is encoded as a selenocysteine by the opal codon UGA. (1016 aa) |
| | STY3841 | Formate dehydrogenase-O beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. (300 aa) |
| | STY3842 | Formate dehydrogenase-O gamma subunit; Fasta hit to FDNI_ECOLI (217 aa), 49% identity in 214 aa overlap; Orthologue of E. coli fdoI (FDOI_ECOLI); Fasta hit to FDOI_ECOLI (211 aa), 96% identity in 211 aa overlap. (211 aa) |
| | STY3843 | FdhE protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. (309 aa) |
| | STY3951 | Two-component sensor protein histidine protein kinase; Orthologue of E. coli torS (TORS_ECOLI); Fasta hit to TORS_ECOLI (904 aa), 63% identity in 898 aa overlap. (911 aa) |
| | STY3952 | Solute binding receptor protein; Orthologue of E. coli torT (TORT_ECOLI); Fasta hit to TORT_ECOLI (342 aa), 67% identity in 346 aa overlap. (346 aa) |
| | STY3956 | trimethylamine-N-oxide reductase precursor; Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions. (850 aa) |
| | STY3957 | TorD protein; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily. (210 aa) |
| | yhjA | Similar to Escherichia coli probable cytochrome c peroxidase yhjA SW:YHJA_ECOLI (P37197) (465 aa) fasta scores: E(): 0, 82.5% id in 462 aa, and to Pseudomonas aeruginosa cytochrome c551 peroxidase precursor ccpa or pa4587 SW:CCPR_PSEAE (P14532) (346 aa) fasta scores: E(): 0, 42.0% id in 305 aa; Orthologue of E. coli yhjA (YHJA_ECOLI); Fasta hit to YHJA_ECOLI (465 aa), 83% identity in 462 aa overlap. (466 aa) |
| | ccmA2 | Similar to Escherichia coli heme exporter protein A SW:CCMA_ECOLI () (205 aa) fasta scores: E(): 0, 79.5% id in 200 aa; Fasta hit to YBBA_ECOLI (228 aa), 32% identity in 203 aa overlap; Fasta hit to BTUD_ECOLI (249 aa), 31% identity in 206 aa overlap. (205 aa) |
| | ccmB2 | Similar to Escherichia coli heme exporter protein B CcmB SW:CCMB_ECOLI (P33930) (220 aa) fasta scores: E(): 0, 86.2% id in 217 aa. (218 aa) |
| | ccmC2 | Heme exporter protein C2; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. (248 aa) |
| | ccmD2 | Heme exporter protein D2; Orthologue of E. coli ccmD (CCMD_ECOLI); Fasta hit to CCMD_ECOLI (69 aa), 77% identity in 70 aa overlap. (70 aa) |
| | ccmE2 | Cytochrome c-type biogenesis protein E2; Orthologue of E. coli ccmE (CCME_ECOLI); Fasta hit to CCME_ECOLI (159 aa), 84% identity in 159 aa overlap. (159 aa) |
| | ccmF2 | Similar to Escherichia coli cytochrome c-type biogenesis protein CcmF SW:CCMF_ECOLI (P33927) (647 aa) fasta scores: E(): 0, 85.1% id in 646 aa; Fasta hit to NRFE_ECOLI (552 aa), 38% identity in 611 aa overlap. (643 aa) |
| | dsbE2 | Similar to Escherichia coli thiol:disulfide interchange protein DsbE or CcmG precursor SW:DSBE_ECOLI (P33926) (185 aa) fasta scores: E(): 0, 85.9% id in 185 aa. (185 aa) |
| | ccmH2 | Cytochrome c-type biogenesis protein H2; Orthologue of E. coli ccmH (CCMH_ECOLI); Fasta hit to CCMH_ECOLI (350 aa), 74% identity in 346 aa overlap. (347 aa) |
| | STY4008 | Putative inner membrane transport protein; Involved in the efflux of purine ribonucleosides, such as guanosine, adenosine and especially inosine. Involved in the resistance to 6-mercaptopurine (By similarity). Required for triggering apoptosis and bacterial survival inside macrophages. (397 aa) |
| | cysE | Similar to Escherichia coli serine acetyltransferase cysE SW:CYSE_ECOLI (P05796) (273 aa) fasta scores: E(): 0, 95.6% id in 273 aa; Belongs to the transferase hexapeptide repeat family. (273 aa) |
| | STY4113 | L-seryl-tRNA(Ser) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis; Belongs to the SelA family. (463 aa) |
| | STY4114 | Selenocysteine-specific elongation factor; Orthologue of E. coli selB (SELB_ECOLI); Fasta hit to SELB_ECOLI (614 aa), 85% identity in 615 aa overlap. (616 aa) |
| | STY4132 | Putative electron-transport protein; Similar to e.g. Salmonella typhimurium LT2 thiosulfate reductase electron transport protein PhsB phsB SW:PHSB_SALTY (P37601) (192 aa) fasta scores: E(): 2.2e-16, 38.2% id in 157 aa, and to Rhodospirillum rubrum iron-sulfur protein cooF SW:COOF_RHORU (P31894) (190 aa) fasta scores: E(): 6.2e-16, 39.9% id in 158 aa; Fasta hit to HYFA_ECOLI (205 aa), 37% identity in 185 aa overlap; Fasta hit to YGFS_ECOLI (162 aa), 47% identity in 154 aa overlap; Fasta hit to HYDN_ECOLI (175 aa), 61% identity in 162 aa overlap; Fasta hit to HYCB_ECOLI (203 aa), 40% ide [...] (157 aa) |
| | bisC | Similar to Escherichia coli biotin sulfoxide reductase 1 bisC SW:BISC_ECOLI (P20099) (777 aa) fasta scores: E(): 0, 85.5% id in 777 aa; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (777 aa) |
| | glpE | Conserved hypothetical protein; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide. (108 aa) |
| | nirC | Putative nitrite transporter; Similar to Salmonella typhimurium potential nitrite transporter nirC SW:NIRC_SALTY (P25926) (269 aa) fasta scores: E(): 0, 94.1% id in 269 aa, Escherichia coli potential nitrite transporter nirC SW:NIRC_ECOLI (P11097) (268 aa) fasta scores: E(): 0, 92.1% id in 267 aa and Chlamydomonas reinhardtii chloroplast nitrite transporter nar1 TR:Q9LE25 (Q9LE25) (355 aa) fasta scores: E(): 1.2e-18, 34.7% id in 248 aa. (269 aa) |
| | nirD | Nitrite reductase (NAD(P)H) small subunit; Required for activity of the reductase. (108 aa) |
| | nirB | Similar to Escherichia coli nitrite reductase [NAD nirB SW:NIRB_ECOLI (P08201) (847 aa) fasta scores: E(): 0, 95.0% id in 847 aa; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (847 aa) |
| | STY4474 | Hypothetical protein; No significant database matches. CDS DNA has a low GC content, 31.97%. (48 aa) |
| | STY4475 | Cytochrome c552 precursor; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (478 aa) |
| | STY4476 | Similar to Escherichia coli cytochrome c-type protein NrfB precursor SW:NRFB_ECOLI (P32707) (188 aa) fasta scores: E(): 0, 88.3% id in 188 aa and to Haemophilus influenzae cytochrome c-type protein NrfB precursor HI1068 SW:NRFB_HAEIN (P45016) (226 aa) fasta scores: E(): 6.6e-24, 45.1% id in 153 aa. (188 aa) |
| | STY4477 | Cytochrome c-type biogenesis protein; Similar to Escherichia coli NrfC protein SW:NRFC_ECOLI (P32708) (223 aa) fasta scores: E(): 0, 90.6% id in 223 aa, and to Haemophilus influenzae NrfC protein homolog HI1067 SW:NRFC_HAEIN (P45015) (225 aa) fasta scores: E(): 0, 61.6% id in 219 aa. Contains N-terminal signal sequence, probable secreted protein. (223 aa) |
| | STY4478 | Cytochrome c-type biogenesis protein; Similar to Escherichia coli NrfD protein SW:NRFD_ECOLI (P32709) (318 aa) fasta scores: E(): 0, 86.5% id in 318 aa, and to Wolinella succinogenes polysulfide reductase chain c PsrC SW:PSRC_WOLSU (P31077) (317 aa) fasta scores: E(): 0, 38.9% id in 316 aa. Predicted hydrophobic membrane spanning domains, integral membrane protein. (318 aa) |
| | STY4479 | Similar to Escherichia coli cytochrome c-type biogenesis protein CcmF SW:CCMF_ECOLI (P33927) (647 aa) fasta scores: E(): 0, 38.3% id in 637 aa, and to Pseudomonas fluorescens inner membrane or periplasmic protein PFCYT4 TR:Q51753 (EMBL:Z47979) (714 aa) fasta scores: E(): 0, 36.0% id in 702 aa. Predicted hydrophobic membrane spanning domains, integral membrane protein. (578 aa) |
| | STY4480 | Cytochrome c-type biogenesis protein; Possible subunit of a heme lyase. (170 aa) |
| | STY4481 | NrfG protein; Similar to Escherichia coli NrfG SW:NRFG_ECOLI (P32712) (198 aa) fasta scores: E(): 0, 70.2% id in 191 aa and to Yersinia enterocolitica YfrE TR:Q56924 (EMBL:X76082) (257 aa) fasta scores: E(): 4.8e-21, 39.0% id in 182 aa. Contains a predicted transmembrane helix. It also shows some similarity to cytochrome c-type biogenesis proteins from several organisms. (206 aa) |
| | gltP | Proton glutamate symport protein; Catalyzes the proton-dependent transport of glutamate and aspartate; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. GltP subfamily. (436 aa) |
| | STY4484 | Similar to Escherichia coli formate dehydrogenase H FdhF SW:FDHF_ECOLI (P07658) (715 aa) fasta scores: E(): 0, 97.5% id in 714 aa, and to Methanobacterium thermoformicicum formate dehydrogenase, alpha subunit FdhA TR:Q50569 (EMBL:U52681) (681 aa) fasta scores: E(): 0, 41.9% id in 688 aa. The CDS contains an opal UGA stop codon at position 140. In E. coli the nonsense mutation is supressed by the addition of the non standard amino acid, selenocysteine. Upstream of the opal codon there is a 20 bp stem loop structure; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (715 aa) |
| | dmsC | Similar to Yersinia pestis dimethyl sulfoxide reductase subunit C DmsC TR:Q9X6B4 (EMBL:AF135170) (286 aa) fasta scores: E(): 3.6e-16, 34.4% id in 273 aa, and to Escherichia coli anaerobic dimethyl sulfoxide reductase chain C SW:DMSC_ECOLI (P18777) (287 aa) fasta scores: E(): 4.2e-16, 34.3% id in 274 aa. Predicted hydrophobic membrane spanning domains, integral membrane protein. (257 aa) |
| | STY4509 | Similar to Escherichia coli hypothetical 23.6 kDa protein in speG-dgsA intergenic region precursor YnfI SW:YNFI_ECOLI (P76174) (207 aa) fasta scores: E(): 2.7e-17, 32.8% id in 195 aa. (228 aa) |
| | yjeB | Conserved hypothetical protein; Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity. (141 aa) |
| | ytfE | Conserved hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters damaged by oxidative and nitrosative stress conditions. (220 aa) |
| | cysQ | cysQ protein; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. (246 aa) |
| | STY4902 | Similar to Pseudomonas aeruginosa conserved hypothetical protein PA1357 TR:AAG04746 (EMBL:AE004565) (158 aa) fasta scores: E(): 0, 69.7% id in 152 aa, and to Bacillus subtilis hypothetical 17.5 kDa protein YwhH TR:P71000 (EMBL:Z80360) (157 aa) fasta scores: E(): 2e-27, 48.7% id in 154 aa. (152 aa) |
