STRINGSTRING
STY0866 STY0866 STY0867 STY0867 STY0868 STY0868 STY2159 STY2159 STY2160 STY2160 fliY fliY
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STY0866Glutamine transport ATP-binding protein GlnQ; Fasta hit to ARTP_ECOLI (242 aa), 44% identity in 241 aa overlap; Fasta hit to FEPC_ECOLI (271 aa), 34% identity in 220 aa overlap; Fasta hit to YCFV_ECOLI (233 aa), 40% identity in 209 aa overlap; Fasta hit to SSUB_ECOLI (255 aa), 39% identity in 226 aa overlap; Fasta hit to YBBA_ECOLI (228 aa), 36% identity in 224 aa overlap; Fasta hit to LIVF_ECOLI (237 aa), 31% identity in 226 aa overlap; Fasta hit to PHNK_ECOLI (252 aa), 30% identity in 247 aa overlap; Fasta hit to GLTL_ECOLI (241 aa), 53% identity in 239 aa overlap; Fasta hit to TAUB_ [...] (240 aa)
STY0867Glutamine transport system permease protein GlnP; Fasta hit to GLTK_ECOLI (224 aa), 32% identity in 224 aa overlap; Fasta hit to YECS_ECOLI (222 aa), 37% identity in 216 aa overlap; Fasta hit to ARTQ_ECOLI (238 aa), 30% identity in 217 aa overlap; Fasta hit to HISM_ECOLI (238 aa), 31% identity in 206 aa overlap; Orthologue of E. coli glnP (GLNP_ECOLI); Fasta hit to GLNP_ECOLI (219 aa), 96% identity in 219 aa overlap. (219 aa)
STY0868Glutamine-binding periplasmic protein precursor; Fasta hit to FLIY_ECOLI (266 aa), 34% identity in 257 aa overlap; Fasta hit to HISJ_ECOLI (260 aa), 32% identity in 257 aa overlap; Fasta hit to ARTI_ECOLI (243 aa), 33% identity in 244 aa overlap; Fasta hit to ARGT_ECOLI (260 aa), 35% identity in 254 aa overlap; Fasta hit to ARTJ_ECOLI (243 aa), 30% identity in 244 aa overlap; Orthologue of E. coli glnH (GLNH_ECOLI); Fasta hit to GLNH_ECOLI (248 aa), 97% identity in 248 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (248 aa)
STY2159Similar to many ABC-transporter ATP-binding proteins, mostly of amino-acid (or related) transport systeams e.g. Agrobacterium tumefaciens octopine permease ATP-binding protein P SW:OCCP_AGRT6 (P35117) (262 aa) fasta scores: E(): 0, 52.6% id in 249 aa; Fasta hit to ARTP_ECOLI (242 aa), 48% identity in 238 aa overlap; Fasta hit to FEPC_ECOLI (271 aa), 30% identity in 222 aa overlap; Fasta hit to YCFV_ECOLI (233 aa), 36% identity in 229 aa overlap; Fasta hit to SSUB_ECOLI (255 aa), 37% identity in 217 aa overlap; Fasta hit to YBBA_ECOLI (228 aa), 38% identity in 229 aa overlap; Fasta hit [...] (250 aa)
STY2160Putative ABC transporter membrane protein; Similar to Escherichia coli hypothetical amino-acid ABC transporter permease protein YecS yecS SW:YECS_ECOLI (P76315) (222 aa) fasta scores: E(): 0, 93.2% id in 222 aa, and to Deinococcus radiodurans amino acid ABC transporter, permease protein dr0565 TR:Q9RWV0 (EMBL:AE001914) (226 aa) fasta scores: E(): 0, 50.5% id in 216 aa; Fasta hit to GLTK_ECOLI (224 aa), 38% identity in 212 aa overlap; Fasta hit to ARTQ_ECOLI (238 aa), 34% identity in 236 aa overlap; Fasta hit to ARTM_ECOLI (222 aa), 37% identity in 224 aa overlap; Fasta hit to GLNP_ECOL [...] (222 aa)
fliYSimilar to Escherichia coli cystine-binding periplasmic protein precursor fliY SW:FLIY_ECOLI (P39174) (266 aa) fasta scores: E(): 0, 92.5% id in 266 aa and Salmonella typhimurium FliY fliY TR:Q9ZNM2 (EMBL:AB010947) (266 aa) fasta scores: E(): 0, 98.9% id in 266 aa. Contains a probable N-terminal signal sequence; Orthologue of E. coli fliY (FLIY_ECOLI); Fasta hit to FLIY_ECOLI (266 aa), 93% identity in 266 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (266 aa)
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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